[HTML][HTML] CNN-based lung CT registration with multiple anatomical constraints

A Hering, S Häger, J Moltz, N Lessmann… - Medical Image …, 2021 - Elsevier
Deep-learning-based registration methods emerged as a fast alternative to conventional
registration methods. However, these methods often still cannot achieve the same …

GraphRegNet: Deep graph regularisation networks on sparse keypoints for dense registration of 3D lung CTs

L Hansen, MP Heinrich - IEEE Transactions on Medical Imaging, 2021 - ieeexplore.ieee.org
In the last two years learning-based methods have started to show encouraging results in
different supervised and unsupervised medical image registration tasks. Deep neural …

A structured L-BFGS method and its application to inverse problems

F Mannel, HO Aggrawal, J Modersitzki - Inverse Problems, 2024 - iopscience.iop.org
Many inverse problems are phrased as optimization problems in which the objective
function is the sum of a data-fidelity term and a regularization. Often, the Hessian of the …

Fast GPU 3D diffeomorphic image registration

M Brunn, N Himthani, G Biros, M Mehl… - Journal of parallel and …, 2021 - Elsevier
Abstract 3D image registration is one of the most fundamental and computationally
expensive operations in medical image analysis. Here, we present a mixed-precision …

CLAIRE: A distributed-memory solver for constrained large deformation diffeomorphic image registration

A Mang, A Gholami, C Davatzikos, G Biros - SIAM Journal on Scientific …, 2019 - SIAM
With this work we release CLAIRE, a distributed-memory implementation of an effective
solver for constrained large deformation diffeomorphic image registration problems in three …

Whole-body soft-tissue lesion tracking and segmentation in longitudinal CT imaging studies

A Hering, F Peisen, T Amaral… - … Imaging with Deep …, 2021 - proceedings.mlr.press
In follow-up CT examinations of cancer patients, therapy success is evaluated by estimating
the change in tumor size. This process is time-consuming and error-prone. We present a …

Robust, fast and accurate: a 3-step method for automatic histological image registration

J Lotz, N Weiss, S Heldmann - arXiv preprint arXiv:1903.12063, 2019 - arxiv.org
We present a 3-step registration pipeline for differently stained histological serial sections
that consists of 1) a robust pre-alignment, 2) a parametric registration computed on coarse …

CLAIRE—Parallelized diffeomorphic image registration for large-scale biomedical imaging applications

N Himthani, M Brunn, JY Kim, M Schulte, A Mang… - Journal of …, 2022 - mdpi.com
We study the performance of CLAIRE—a diffeomorphic multi-node, multi-GPU image-
registration algorithm and software—in large-scale biomedical imaging applications with …

Multimodal image registration for liver radioembolization planning and patient assessment

N Spahr, S Thoduka, N Abolmaali, R Kikinis… - International journal of …, 2019 - Springer
Purpose Multimodal imaging plays a key role in patient assessment and treatment planning
in liver radioembolization. It will reach its full potential for convenient use in combination with …

Multi-node multi-GPU diffeomorphic image registration for large-scale imaging problems

M Brunn, N Himthani, G Biros, M Mehl… - … Conference for High …, 2020 - ieeexplore.ieee.org
We present a Gauss-Newton-Krylov solver for large deformation diffeomorphic image
registration. We extend the publicly available CLAIRE library to multi-node multi-graphics …