Progress in soybean functional genomics over the past decade

M Zhang, S Liu, Z Wang, Y Yuan… - Plant Biotechnology …, 2022 - Wiley Online Library
Soybean is one of the most important oilseed and fodder crops. Benefiting from the efforts of
soybean breeders and the development of breeding technology, large number of …

[HTML][HTML] Plant speciation through chromosome instability and ploidy change: cellular mechanisms, molecular factors and evolutionary relevance

N De Storme, A Mason - Current Plant Biology, 2014 - Elsevier
Plant speciation and diversification strongly rely on structural changes in the nuclear
genome, both at the whole ploidy and individual chromosome level. Phylogenetic …

The transcriptional landscape of polyploid wheat

RH Ramírez-González, P Borrill, D Lang… - Science, 2018 - science.org
INTRODUCTION Polyploidy, arising from whole-genome duplication or interspecific
hybridization, is ubiquitous across the plant and fungal kingdoms. The presence of highly …

The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes

S Liu, Y Liu, X Yang, C Tong, D Edwards… - Nature …, 2014 - nature.com
Polyploidization has provided much genetic variation for plant adaptive evolution, but the
mechanisms by which the molecular evolution of polyploid genomes establishes genetic …

A Y-encoded suppressor of feminization arose via lineage-specific duplication of a cytokinin response regulator in kiwifruit

T Akagi, IM Henry, H Ohtani, T Morimoto… - The Plant …, 2018 - academic.oup.com
Dioecy, the presence of male and female flowers on distinct individuals, has evolved
independently in multiple plant lineages, and the genes involved in this differential …

Global dissection of alternative splicing in paleopolyploid soybean

Y Shen, Z Zhou, Z Wang, W Li, C Fang, M Wu… - The Plant …, 2014 - academic.oup.com
Alternative splicing (AS) is common in higher eukaryotes and plays an important role in
gene posttranscriptional regulation. It has been suggested that AS varies dramatically …

Identification and functional characterization of silicon transporters in soybean using comparative genomics of major intrinsic proteins in Arabidopsis and rice

RK Deshmukh, J Vivancos, V Guérin, H Sonah… - Plant molecular …, 2013 - Springer
Silicon (Si) confers several benefits to many plant species when absorbed as silicic acid
through nodulin 26-like intrinsic proteins (NIPs). The NIPs belong to major intrinsic protein …

Dosage, duplication, and diploidization: clarifying the interplay of multiple models for duplicate gene evolution over time

GC Conant, JA Birchler, JC Pires - Current opinion in plant biology, 2014 - Elsevier
Highlights•Dosage balance is fluid and will change over time.•Duplicate genes are
preserved by interplay of multiple overlapping mechanisms.•Distinguishing duplicate gene …

RNA-seq analyses of multiple meristems of soybean: novel and alternative transcripts, evolutionary and functional implications

L Wang, C Cao, Q Ma, Q Zeng, H Wang, Z Cheng… - BMC plant biology, 2014 - Springer
Background Soybean is one of the most important crops, providing large amounts of dietary
proteins and edible oil, and is also an excellent model for studying evolution of duplicated …

Genomic evidence for rediploidization and adaptive evolution following the whole-genome triplication

X Feng, Q Chen, W Wu, J Wang, G Li, S Xu… - Nature …, 2024 - nature.com
Abstract Whole-genome duplication (WGD), or polyploidy, events are widespread and
significant in the evolutionary history of angiosperms. However, empirical evidence for …