Tensor denoising of multidimensional MRI data

JL Olesen, A Ianus, L Østergaard… - Magnetic resonance …, 2023 - Wiley Online Library
Purpose To develop a denoising strategy leveraging redundancy in high‐dimensional data.
Theory and Methods The SNR fundamentally limits the information accessible by MRI. This …

[HTML][HTML] MP-PCA denoising of fMRI time-series data can lead to artificial activation “spreading”

FF Fernandes, JL Olesen, SN Jespersen, N Shemesh - NeuroImage, 2023 - Elsevier
MP-PCA denoising has become the method of choice for denoising MRI data since it
provides an objective threshold to separate the signal components from unwanted thermal …

[HTML][HTML] Evaluating increases in sensitivity from NORDIC for diverse fMRI acquisition strategies

LT Dowdle, L Vizioli, S Moeller, M Akçakaya, C Olman… - NeuroImage, 2023 - Elsevier
As the neuroimaging field moves towards detecting smaller effects at higher spatial
resolutions, and faster sampling rates, there is increased attention given to the deleterious …

[HTML][HTML] Reliability of resting-state functional connectivity in the human spinal cord: assessing the impact of distinct noise sources

M Kaptan, U Horn, SJ Vannesjo, T Mildner, N Weiskopf… - Neuroimage, 2023 - Elsevier
The investigation of spontaneous fluctuations of the blood-oxygen-level-dependent (BOLD)
signal has recently been extended from the brain to the spinal cord, where it has stimulated …

[HTML][HTML] MP-PCA denoising for diffusion MRS data: promises and pitfalls

J Mosso, D Simicic, K Şimşek, R Kreis, C Cudalbu… - NeuroImage, 2022 - Elsevier
Diffusion-weighted (DW) magnetic resonance spectroscopy (MRS) suffers from a lower
signal to noise ratio (SNR) compared to conventional MRS owing to the addition of diffusion …

Subject-specific features of excitation/inhibition profiles in neurodegenerative diseases

A Monteverdi, F Palesi, A Costa, P Vitali… - Frontiers in Aging …, 2022 - frontiersin.org
Brain pathologies are characterized by microscopic changes in neurons and synapses that
reverberate into large scale networks altering brain dynamics and functional states. An …

Efficient PCA denoising of spatially correlated redundant MRI data

RN Henriques, A Ianuş, L Novello, J Jovicich… - Imaging …, 2023 - direct.mit.edu
Marčenko-Pastur PCA (MPPCA) denoising is emerging as an effective means for noise
suppression in MR imaging (MRI) acquisitions with redundant dimensions. However …

Denoise functional magnetic resonance imaging with random matrix theory based principal component analysis

W Zhu, X Ma, XH Zhu, K Ugurbil… - IEEE Transactions on …, 2022 - ieeexplore.ieee.org
High-resolution functional MRI (fMRI) is largely hindered by random thermal noise. Random
matrix theory (RMT)-based principal component analysis (PCA) is promising to reduce such …

PIRACY: An optimized pipeline for functional connectivity analysis in the rat brain

Y Diao, T Yin, R Gruetter, IO Jelescu - Frontiers in Neuroscience, 2021 - frontiersin.org
Resting state functional MRI (rs-fMRI) is a widespread and powerful tool for investigating
functional connectivity (FC) and brain disorders. However, FC analysis can be seriously …

Virtual brain simulations reveal network-specific parameters in neurodegenerative dementias

A Monteverdi, F Palesi, M Schirner… - Frontiers in Aging …, 2023 - frontiersin.org
Introduction Neural circuit alterations lay at the core of brain physiopathology, and yet are
hard to unveil in living subjects. The Virtual Brain (TVB) modeling, by exploiting structural …