Roles for retrotransposon insertions in human disease

DC Hancks, HH Kazazian - Mobile DNA, 2016 - Springer
Over evolutionary time, the dynamic nature of a genome is driven, in part, by the activity of
transposable elements (TE) such as retrotransposons. On a shorter time scale it has been …

Restricting retrotransposons: a review

JL Goodier - Mobile DNA, 2016 - Springer
Retrotransposons have generated about 40% of the human genome. This review examines
the strategies the cell has evolved to coexist with these genomic “parasites”, focussing on …

Specific and nonhepatotoxic degradation of nuclear hepatitis B virus cccDNA

J Lucifora, Y Xia, F Reisinger, K Zhang, D Stadler… - Science, 2014 - science.org
Current antiviral agents can control but not eliminate hepatitis B virus (HBV), because HBV
establishes a stable nuclear covalently closed circular DNA (cccDNA). Interferon-α treatment …

The APOBEC protein family: united by structure, divergent in function

JD Salter, RP Bennett, HC Smith - Trends in biochemical sciences, 2016 - cell.com
The APOBEC (apolipoprotein B mRNA editing catalytic polypeptide-like) family of proteins
have diverse and important functions in human health and disease. These proteins have an …

[HTML][HTML] APOBECs and virus restriction

RS Harris, JP Dudley - Virology, 2015 - Elsevier
The APOBEC family of single-stranded DNA cytosine deaminases comprises a formidable
arm of the vertebrate innate immune system. Pre-vertebrates express a single APOBEC …

The roles of APOBEC-mediated RNA editing in SARS-CoV-2 mutations, replication and fitness

K Kim, P Calabrese, S Wang, C Qin, Y Rao, P Feng… - Scientific Reports, 2022 - nature.com
During COVID-19 pandemic, mutations of SARS-CoV-2 produce new strains that can be
more infectious or evade vaccines. Viral RNA mutations can arise from misincorporation by …

[HTML][HTML] Methods and applications of CRISPR-mediated base editing in eukaryotic genomes

GT Hess, J Tycko, D Yao, MC Bassik - Molecular cell, 2017 - cell.com
The past several years have seen an explosion in development of applications for the
CRISPR-Cas9 system, from efficient genome editing, to high-throughput screening, to …

Alu elements: know the SINEs

P Deininger - Genome biology, 2011 - Springer
Alu elements: know the SINEs | Genome Biology Skip to main content SpringerLink Account
Menu Find a journal Publish with us Track your research Search Cart 1.Home 2.Genome …

The influence of LINE‐1 and SINE retrotransposons on mammalian genomes

SR Richardson, AJ Doucet, HC Kopera… - Mobile DNA …, 2015 - Wiley Online Library
Transposable elements (TEs) or “jumping genes” historically have been disparaged as a
class of “junk DNA” in mammalian genomes (1, 2). The advent of whole genome DNA …

APOBEC mutagenesis is a common process in normal human small intestine

Y Wang, PS Robinson, THH Coorens, L Moore… - Nature …, 2023 - nature.com
APOBEC mutational signatures SBS2 and SBS13 are common in many human cancer
types. However, there is an incomplete understanding of its stimulus, when it occurs in the …