Measuring and modeling apoptosis in single cells

SL Spencer, PK Sorger - Cell, 2011 - cell.com
Cell death plays an essential role in the development of tissues and organisms, the etiology
of disease, and the responses of cells to therapeutic drugs. Here we review progress made …

Systems biology in immunology: a computational modeling perspective

RN Germain, M Meier-Schellersheim… - Annual review of …, 2011 - annualreviews.org
Systems biology is an emerging discipline that combines high-content, multiplexed
measurements with informatic and computational modeling methods to better understand …

[HTML][HTML] Realizing the promise of reverse phase protein arrays for clinical, translational, and basic research: a workshop report: the RPPA (Reverse Phase Protein …

R Akbani, KF Becker, N Carragher, T Goldstein… - Molecular & cellular …, 2014 - Elsevier
Reverse phase protein array (RPPA) technology introduced a miniaturized “antigen-down”
or “dot-blot” immunoassay suitable for quantifying the relative, semi-quantitative or …

[图书][B] Cellular signal processing: an introduction to the molecular mechanisms of signal transduction

F Marks, U Klingmüller, K Müller-Decker - 2017 - taylorfrancis.com
Cellular Signal Processing offers a unifying view of cell signaling based on the concept that
protein interactions act as sophisticated data processing networks that govern intracellular …

Statistical similarities between transcriptomics and quantitative shotgun proteomics data

N Pavelka, ML Fournier, SK Swanson… - Molecular & Cellular …, 2008 - ASBMB
If the large collection of microarray-specific statistical tools was applicable to the analysis of
quantitative shotgun proteomics datasets, it would certainly foster an important advancement …

Molecular simulations of protein dynamics: new windows on mechanisms in biology

GG Dodson, DP Lane, CS Verma - EMBO reports, 2008 - embopress.org
Recent advances in computer hardware and software have led to the development of
increasingly successful molecular simulations of protein structural dynamics that are intrinsic …

Multiscale modeling for biologists

M Meier‐Schellersheim, IDC Fraser… - … : Systems Biology and …, 2009 - Wiley Online Library
Biomedical research frequently involves performing experiments and developing
hypotheses that link different scales of biological systems such as, for instance, the scales of …

Protein microarrays for personalized medicine

X Yu, N Schneiderhan-Marra, TO Joos - Clinical chemistry, 2010 - academic.oup.com
Background: Over the last 10 years, DNA microarrays have achieved a robust analytical
performance, enabling their use for analyzing the whole transcriptome or for screening …

Unraveling human complexity and disease with systems biology and personalized medicine

S Naylor, JY Chen - Personalized medicine, 2010 - Taylor & Francis
We are all perplexed that current medical practice often appears maladroit in curing our
individual illnesses or disease. However, as is often the case, a lack of understanding, tools …

Models of signalling networks–what cell biologists can gain from them and give to them

KA Janes, DA Lauffenburger - Journal of cell science, 2013 - journals.biologists.com
Computational models of cell signalling are perceived by many biologists to be prohibitively
complicated. Why do math when you can simply do another experiment? Here, we explain …