[HTML][HTML] An introduction to topological data analysis: fundamental and practical aspects for data scientists

F Chazal, B Michel - Frontiers in artificial intelligence, 2021 - frontiersin.org
Topological Data Analysis (TDA) is a recent and fast growing field providing a set of new
topological and geometric tools to infer relevant features for possibly complex data. This …

Revealing key structural features hidden in liquids and glasses

H Tanaka, H Tong, R Shi, J Russo - Nature Reviews Physics, 2019 - nature.com
A great success of solid state physics comes from the characterization of crystal structures in
the reciprocal (wave vector) space. The power of structural characterization in Fourier space …

[PDF][PDF] A roadmap for the computation of persistent homology

N Otter, MA Porter, U Tillmann, P Grindrod… - EPJ Data Science, 2017 - Springer
Persistent homology (PH) is a method used in topological data analysis (TDA) to study
qualitative features of data that persist across multiple scales. It is robust to perturbations of …

Hierarchical structures of amorphous solids characterized by persistent homology

Y Hiraoka, T Nakamura, A Hirata… - Proceedings of the …, 2016 - National Acad Sciences
This article proposes a topological method that extracts hierarchical structures of various
amorphous solids. The method is based on the persistence diagram (PD), a mathematical …

[图书][B] Statistical shape analysis: with applications in R

IL Dryden, KV Mardia - 2016 - books.google.com
A thoroughly revised and updated edition of this introduction to modern statistical methods
for shape analysis Shape analysis is an important tool in the many disciplines where objects …

Persistence weighted Gaussian kernel for topological data analysis

G Kusano, Y Hiraoka… - … conference on machine …, 2016 - proceedings.mlr.press
Topological data analysis (TDA) is an emerging mathematical concept for characterizing
shapes in complex data. In TDA, persistence diagrams are widely recognized as a useful …

Persistent homology analysis for materials research and persistent homology software: HomCloud

I Obayashi, T Nakamura, Y Hiraoka - journal of the physical society of …, 2022 - journals.jps.jp
This paper introduces persistent homology, which is a powerful tool to characterize the
shape of data using the mathematical concept of topology. We explain the fundamental idea …

Structure and properties of densified silica glass: characterizing the order within disorder

Y Onodera, S Kohara, PS Salmon, A Hirata… - NPG Asia …, 2020 - nature.com
The broken symmetry in the atomic-scale ordering of glassy versus crystalline solids leads to
a daunting challenge to provide suitable metrics for describing the order within disorder …

Pore configuration landscape of granular crystallization

M Saadatfar, H Takeuchi, V Robins, N Francois… - Nature …, 2017 - nature.com
Uncovering grain-scale mechanisms that underlie the disorder–order transition in
assemblies of dissipative, athermal particles is a fundamental problem with technological …

Tree-sliced variants of Wasserstein distances

T Le, M Yamada, K Fukumizu… - Advances in neural …, 2019 - proceedings.neurips.cc
Optimal transport (\OT) theory defines a powerful set of tools to compare probability
distributions.\OT~ suffers however from a few drawbacks, computational and statistical …