Cliquesnv: Scalable reconstruction of intra-host viral populations from ngs reads
Highly mutable RNA viruses such as influenza A virus, human immunodeficiency virus and
hepatitis C virus exist in infected hosts as highly heterogeneous populations of closely …
hepatitis C virus exist in infected hosts as highly heterogeneous populations of closely …
[PDF][PDF] CliqueSNV: an efficient noise reduction technique for accurate assembly of viral variants from NGS data
Rapidly evolving RNA viruses continuously produce viral minority variants following
infection that can quickly spread and become dominant variants if they are drug-resistant or …
infection that can quickly spread and become dominant variants if they are drug-resistant or …
Algorithms for Analysis of Heterogeneous Cancer and Viral Populations Using High-Throughput Sequencing Data
V Tsyvina - 2021 - scholarworks.gsu.edu
Next-generation sequencing (NGS) technologies experienced giant leaps in recent years.
Short read samples reach millions of reads, and the number of samples has been growing …
Short read samples reach millions of reads, and the number of samples has been growing …
Methods for Viral Intra-Host and Inter-Host Data Analysis for Next-Generation Sequencing Technologies
S Knyazev - 2021 - scholarworks.gsu.edu
The deep coverage offered by next-generation sequencing (NGS) technology has facilitated
the reconstruction of intra-host RNA viral populations at an unprecedented level of detail …
the reconstruction of intra-host RNA viral populations at an unprecedented level of detail …
Algorithms for analysis of next-generation viral sequencing data
A Melnyk - 2021 - scholarworks.gsu.edu
RNA viruses mutate at extremely high rates, forming an intra-host viral population of closely
related variants, which allows them to evade the host's immune system and makes them …
related variants, which allows them to evade the host's immune system and makes them …