Atypical acute myeloid leukemia-specific transcripts generate shared and immunogenic MHC class-I-associated epitopes

G Ehx, JD Larouche, C Durette, JP Laverdure… - Immunity, 2021 - cell.com
Acute myeloid leukemia (AML) has not benefited from innovative immunotherapies, mainly
because of the lack of actionable immune targets. Using an original proteogenomic …

Widespread establishment and regulatory impact of Alu exons in human genes

S Shen, L Lin, JJ Cai, P Jiang… - Proceedings of the …, 2011 - National Acad Sciences
The Alu element has been a major source of new exons during primate evolution.
Thousands of human genes contain spliced exons derived from Alu elements. However …

Transcription factors: their potential as targets for an individualized therapeutic approach to cancer

C Mees, J Nemunaitis, N Senzer - Cancer gene therapy, 2009 - nature.com
Pro-cancer signals are controlled by the expression and transcription of oncogenes.
Transcription of DNA is dependent on the spatially and temporally coordinated interaction …

Unbiased screening for transcriptional targets of ZKSCAN3 identifies integrin β4 and vascular endothelial growth factor as downstream targets

L Yang, L Zhang, Q Wu, DD Boyd - Journal of Biological Chemistry, 2008 - ASBMB
We previously described the novel zinc finger protein ZKSCAN3 as a new" driver" of colon
cancer progression. To investigate the underlying mechanism and because the predicted …

The contribution of transposable elements to Bos taurus gene structure

LM Almeida, IT Silva, WA Silva Jr, JP Castro, PK Riggs… - Gene, 2007 - Elsevier
In an effort to identify the contribution of TEs to bovine genome evolution, the abundance,
distribution and insertional orientation of TEs were examined in all bovine nuclear genes …

[HTML][HTML] Znf706 regulates germ plasm assembly and primordial germ cell development in zebrafish

W Zhang, Y Li, H Li, X Liu, T Zheng, G Li, B Liu… - Journal of Genetics and …, 2024 - Elsevier
The cell fate of primordial germ cells (PGCs) in zebrafish is pre-determined by maternally
deposited germ plasm, which is packaged into ribonucleoprotein complex in oocytes and …

Cellular genes derived from Gypsy/Ty3 retrotransposons in mammalian genomes

JN Volff - Annals of the New York Academy of Sciences, 2009 - Wiley Online Library
Gypsy/Ty3 retrotransposons, a group of long terminal repeat retrotransposons related to
vertebrate retroviruses, are found in the genome of many fungi, plants, and animals …

KAP1-independent transcriptional repression of SCAN-KRAB-containing zinc finger proteins

Y Itokawa, T Yanagawa, H Yamakawa… - Biochemical and …, 2009 - Elsevier
The Krüppel-associated box-containing zinc finger gene family (KRAB-ZNF) is one of the
largest gene families of transcriptional factors in the human genome. Although the functions …

Structural analysis and dimerization profile of the SCAN domain of the pluripotency factor Zfp206

Y Liang, F Huimei Hong, P Ganesan… - Nucleic acids …, 2012 - academic.oup.com
Zfp206 (also named as Zscan10) belongs to the subfamily of C 2 H 2 zinc finger transcription
factors, which is characterized by the N-terminal SCAN domain. The SCAN domain …

[HTML][HTML] Characterization of zinc finger protein 496 that interacts with Jumonji/Jarid2

MR Mysliwiec, T Kim, Y Lee - FEBS letters, 2007 - Elsevier
Jumonij (JMJ)/Jarid2 plays important roles in embryonic development and functions as a
transcriptional repressor. Using yeast two-hybrid screening, we have identified a cofactor of …