Cryptic species as a window into the paradigm shift of the species concept

C Fišer, CT Robinson, F Malard - Molecular Ecology, 2018 - Wiley Online Library
The species concept is the cornerstone of biodiversity science, and any paradigm shift in the
delimitation of species affects many research fields. Many biologists now are embracing a …

Open Science principles for accelerating trait-based science across the Tree of Life

RV Gallagher, DS Falster, BS Maitner… - Nature ecology & …, 2020 - nature.com
Synthesizing trait observations and knowledge across the Tree of Life remains a grand
challenge for biodiversity science. Species traits are widely used in ecological and …

[图书][B] Eco-evolutionary dynamics

AP Hendry - 2017 - degruyter.com
In recent years, scientists have realized that evolution can occur on timescales much shorter
than the" long lapse of ages" emphasized by Darwin—in fact, evolutionary change is …

A linear-time algorithm for Gaussian and non-Gaussian trait evolution models

L Tung Ho, C Ané - Systematic biology, 2014 - academic.oup.com
We developed a linear-time algorithm applicable to a large class of trait evolution models,
for efficient likelihood calculations and parameter inference on very large trees. Our …

[图书][B] Probabilistic historical biogeography: new models for founder-event speciation, imperfect detection, and fossils allow improved accuracy and model-testing

NJ Matzke - 2013 - search.proquest.com
Historical biogeography has a diversity of methods for inferring ancestral geographic ranges
on phylogenies, but many of the methods have conflicting assumptions, and there is no …

Comparing adaptive radiations across space, time, and taxa

RG Gillespie, GM Bennett, L De Meester… - Journal of …, 2020 - academic.oup.com
Adaptive radiation plays a fundamental role in our understanding of the evolutionary
process. However, the concept has provoked strong and differing opinions concerning its …

Muroid rodent phylogenetics: 900-species tree reveals increasing diversification rates

SJ Steppan, JJ Schenk - PloS one, 2017 - journals.plos.org
We combined new sequence data for more than 300 muroid rodent species with our
previously published sequences for up to five nuclear and one mitochondrial genes to …

mvmorph: an r package for fitting multivariate evolutionary models to morphometric data

J Clavel, G Escarguel… - Methods in Ecology and …, 2015 - Wiley Online Library
We present mvmorph, a package of multivariate phylogenetic comparative methods for the r
statistical environment. mvmorph is freely available on the cran package repository …

[图书][B] Modern phylogenetic comparative methods and their application in evolutionary biology: concepts and practice

LZ Garamszegi - 2014 - Springer
Many evolutionary biologists are concerned with the tremendous amount of diversity of
species, and their phenotypes, that we can currently observe in nature, and one of the most …

Rethinking phylogenetic comparative methods

JC Uyeda, R Zenil-Ferguson, MW Pennell - Systematic Biology, 2018 - academic.oup.com
As a result of the process of descent with modification, closely related species tend to be
similar to one another in a myriad different ways. In statistical terms, this means that traits …