Energies and pressures in viruses: contribution of nonspecific electrostatic interactions

A Šiber, AL Božič, R Podgornik - Physical chemistry chemical physics, 2012 - pubs.rsc.org
We summarize some aspects of electrostatic interactions in the context of viruses. A
simplified but, within well defined limitations, reliable approach is used to derive expressions …

[图书][B] Gibbs measures in biology and physics: The Potts model

UA Rozikov - 2022 - World Scientific
In this chapter we give main definitions and useful facts of the theory of Gibbs measures of
lattice spin systems. In the first section we give general definitions. This chapter also …

Parametric approximation of isotropic and anisotropic elastic flow for closed and open curves

JW Barrett, H Garcke, R Nürnberg - Numerische Mathematik, 2012 - Springer
Abstract Deckelnick and Dziuk (Math. Comput. 78 (266): 645–671, 2009) proved a stability
bound for a continuous-in-time semidiscrete parametric finite element approximation of the …

Holliday junctions in the Blume–Capel model of DNA

NM Khatamov - Theoretical and Mathematical Physics, 2021 - Springer
We regard a DNA molecule as a configuration of the Blume–Capel model on paths in a
Cayley tree. We study translation-invariant Gibbs measures (TIGMs) of the model on the …

Self-contact in closed and open Kirchhoff rods

R Singh, J Tiwari, A Kumar - International Journal of Non-Linear Mechanics, 2021 - Elsevier
We consider the problem of an impenetrable Kirchhoff rod in self-contact. The contact is
assumed to be frictionless and of point-contact type. The self-contacted rod is modeled as a …

Tree-hierarchy of DNA and distribution of Holliday junctions

UA Rozikov - Journal of Mathematical Biology, 2017 - Springer
We define a DNA as a sequence of ± 1±1's and embed it on a path of Cayley tree. Using
group representation of the Cayley tree, we give a hierarchy of a countable set of DNAs …

[PDF][PDF] Klein Bottle Logophysics, Self-reference, Heterarchies, Genomic Topologies, Harmonics and Evolution.

DL Rapoport - Quantum, 2016 - researchgate.net
In this first part of a series of articles we discuss the torsion geometry of biology, physics,
cognition and perception. We discuss the relations with the non-linear morphomechanics of …

Importance and effectiveness of representing the shapes of Cosserat rods and framed curves as paths in the special Euclidean algebra

GG Giusteri, E Fried - Journal of Elasticity, 2018 - Springer
We discuss how the shape of a special Cosserat rod can be represented as a path in the
special Euclidean algebra. By shape we mean all those geometric features that are invariant …

Holliday junctions in the set of DNA molecules for new translation-invariant Gibbs measures of the Potts model

NM Khatamov, NN Malikov - Theoretical and Mathematical Physics, 2024 - Springer
We consider a DNA molecule as a configuration of the Potts model on paths of the Cayley
tree. For this model, we study new translation-invariant Gibbs measures. We find exact …

Instability paths in the Kirchhoff–Plateau problem

GG Giusteri, P Franceschini, E Fried - Journal of Nonlinear Science, 2016 - Springer
Abstract The Kirchhoff–Plateau problem concerns the equilibrium shapes of a system in
which a flexible filament in the form of a closed loop is spanned by a soap film, with the …