Dating divergences in the Fungal Tree of Life: review and new analyses

JW Taylor, ML Berbee - Mycologia, 2006 - Taylor & Francis
The collection of papers in this issue of Mycologia documents considerable improvements in
taxon sampling and phylogenetic resolution regarding the Fungal Tree of Life. The new data …

Dating the molecular clock in fungi–how close are we?

ML Berbee, JW Taylor - Fungal Biology Reviews, 2010 - Elsevier
Integration of fungal evolution with the dates of plate tectonic movements, paleoecology, and
the evolution of plants and animals requires a molecular clock. Imperfect though they may …

[HTML][HTML] Estimating the Phanerozoic history of the Ascomycota lineages: combining fossil and molecular data

C Beimforde, K Feldberg, S Nylinder, J Rikkinen… - Molecular phylogenetics …, 2014 - Elsevier
The phylum Ascomycota is by far the largest group in the fungal kingdom. Ecologically
important mutualistic associations such as mycorrhizae and lichens have evolved in this …

Ranking higher taxa using divergence times: a case study in Dothideomycetes

JK Liu, KD Hyde, R Jeewon, AJL Phillips… - Fungal Diversity, 2017 - Springer
The current classification system for the recognition of taxonomic ranks among fungi,
especially at high-ranking level, is subjective. With the development of molecular …

Historical Biogeography and Diversification of Truffles in the Tuberaceae and Their Newly Identified Southern Hemisphere Sister Lineage

G Bonito, ME Smith, M Nowak, RA Healy, G Guevara… - PloS one, 2013 - journals.plos.org
Truffles have evolved from epigeous (aboveground) ancestors in nearly every major lineage
of fleshy fungi. Because accelerated rates of morphological evolution accompany the …

Phylogenomic analyses indicate that early fungi evolved digesting cell walls of algal ancestors of land plants

Y Chang, S Wang, S Sekimoto, AL Aerts… - Genome Biology and …, 2015 - academic.oup.com
As decomposers, fungi are key players in recycling plant material in global carbon cycles.
We hypothesized that genomes of early diverging fungi may have inherited pectinases from …

Estimating divergence times in large phylogenetic trees

T Britton, CL Anderson, D Jacquet… - Systematic …, 2007 - academic.oup.com
A new method, PATHd8, for estimating ultrametric trees from trees with edge (branch)
lengths proportional to the number of substitutions is proposed. The method allows for an …

Cell evolution and Earth history: stasis and revolution

T Cavalier-Smith - … Transactions of the Royal Society B …, 2006 - royalsocietypublishing.org
This synthesis has three main parts. The first discusses the overall tree of life and nature of
the last common ancestor (cenancestor). I emphasize key steps in cellular evolution …

Dothideomycete–Plant Interactions Illuminated by Genome Sequencing and EST Analysis of the Wheat Pathogen Stagonospora nodorum

JK Hane, RGT Lowe, PS Solomon, KC Tan… - The Plant …, 2007 - academic.oup.com
Stagonospora nodorum is a major necrotrophic fungal pathogen of wheat (Triticum
aestivum) and a member of the Dothideomycetes, a large fungal taxon that includes many …

Fungus-like mycelial fossils in 2.4-billion-year-old vesicular basalt

S Bengtson, B Rasmussen, M Ivarsson… - Nature Ecology & …, 2017 - nature.com
Fungi have recently been found to comprise a significant part of the deep biosphere in
oceanic sediments and crustal rocks. Fossils occupying fractures and pores in Phanerozoic …