Chloroplast genomes: diversity, evolution, and applications in genetic engineering

H Daniell, CS Lin, M Yu, WJ Chang - Genome biology, 2016 - Springer
Chloroplasts play a crucial role in sustaining life on earth. The availability of over 800
sequenced chloroplast genomes from a variety of land plants has enhanced our …

Chloroplast translation: structural and functional organization, operational control, and regulation

R Zoschke, R Bock - The Plant Cell, 2018 - academic.oup.com
Chloroplast translation is essential for cellular viability and plant development. Its positioning
at the intersection of organellar RNA and protein metabolism makes it a unique point for the …

Chloroplast and mitochondrial DNA editing in plants

BC Kang, SJ Bae, S Lee, JS Lee, A Kim, H Lee, G Baek… - Nature Plants, 2021 - nature.com
Plant organelles including mitochondria and chloroplasts contain their own genomes, which
encode many genes essential for respiration and photosynthesis, respectively. Gene editing …

Plastid phylogenomic analysis of green plants: a billion years of evolutionary history

MA Gitzendanner, PS Soltis, GKS Wong… - American Journal of …, 2018 - Wiley Online Library
Premise of the Study For the past one billion years, green plants (Viridiplantae) have
dominated global ecosystems, yet many key branches in their evolutionary history remain …

The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

S Wicke, GM Schneeweiss, CW Depamphilis… - Plant molecular …, 2011 - Springer
This review bridges functional and evolutionary aspects of plastid chromosome architecture
in land plants and their putative ancestors. We provide an overview on the structure and …

Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes

JN Timmis, MA Ayliffe, CY Huang, W Martin - Nature reviews genetics, 2004 - nature.com
Genome sequences reveal that a deluge of DNA from organelles has constantly been
bombarding the nucleus since the origin of organelles. Recent experiments have shown that …

Horizontal gene transfer in eukaryotic evolution

PJ Keeling, JD Palmer - Nature Reviews Genetics, 2008 - nature.com
Horizontal gene transfer (HGT; also known as lateral gene transfer) has had an important
role in eukaryotic genome evolution, but its importance is often overshadowed by the greater …

Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns

RK Jansen, Z Cai, LA Raubeson… - Proceedings of the …, 2007 - National Acad Sciences
Angiosperms are the largest and most successful clade of land plants with> 250,000 species
distributed in nearly every terrestrial habitat. Many phylogenetic studies have been based on …

Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus

W Martin, T Rujan, E Richly, A Hansen… - Proceedings of the …, 2002 - National Acad Sciences
Chloroplasts were once free-living cyanobacteria that became endosymbionts, but the
genomes of contemporary plastids encode only≈ 5–10% as many genes as those of their …

Engineering plastid genomes: methods, tools, and applications in basic research and biotechnology

R Bock - Annual Review of Plant Biology, 2015 - annualreviews.org
The small bacterial-type genome of the plastid (chloroplast) can be engineered by genetic
transformation, generating cells and plants with transgenic plastid genomes, also referred to …