Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling

LA Salas, Z Zhang, DC Koestler, RA Butler… - Nature …, 2022 - nature.com
DNA methylation microarrays can be employed to interrogate cell-type composition in
complex tissues. Here, we expand reference-based deconvolution of blood DNA …

Linking prenatal environmental exposures to lifetime health with epigenome-wide association studies: state-of-the-science review and future recommendations

KM Bakulski, F Blostein, SJ London - Environmental health …, 2023 - ehp.niehs.nih.gov
Background: The prenatal environment influences lifetime health; epigenetic mechanisms
likely predominate. In 2016, the first international consortium paper on cigarette smoking …

Mechanisms of DNA methylation in virus-host interaction in hepatitis b infection: Pathogenesis and oncogenetic properties

D Zhang, S Guo, SJ Schrodi - International Journal of Molecular Sciences, 2021 - mdpi.com
Hepatitis B virus (HBV), the well-studied oncovirus that contributes to the majority of
hepatocellular carcinomas (HCC) worldwide, can cause a severe inflammatory …

Cell-specific characterization of the placental methylome

V Yuan, D Hui, Y Yin, MS Peñaherrera, AG Beristain… - BMC genomics, 2021 - Springer
Background DNA methylation (DNAm) profiling has emerged as a powerful tool for
characterizing the placental methylome. However, previous studies have focused primarily …

Epigenetics and ADHD: reflections on current knowledge, research priorities and translational potential

CAM Cecil, JT Nigg - Molecular diagnosis & therapy, 2022 - Springer
Attention-deficit/hyperactivity disorder (ADHD) is a common and debilitating
neurodevelopmental disorder influenced by both genetic and environmental factors …

Gestational perfluoroalkyl substance exposure and DNA methylation at birth and 12 years of age: a longitudinal epigenome-wide association study

Y Liu, MN Eliot, GD Papandonatos… - Environmental …, 2022 - ehp.niehs.nih.gov
Background: DNA methylation alterations may underlie associations between gestational
perfluoroalkyl substances (PFAS) exposure and later-life health outcomes. To the best of our …

Prenatal exposure to per-and polyfluoroalkyl substances, umbilical cord blood DNA methylation, and cardio-metabolic indicators in newborns: the healthy start study

AP Starling, C Liu, G Shen, IV Yang… - Environmental …, 2020 - ehp.niehs.nih.gov
Background: Per-and polyfluoroalkyl substances (PFAS) are environmentally persistent
chemicals widely detected in women of reproductive age. Prenatal PFAS exposure is …

Epigenome-wide meta-analysis of prenatal maternal stressful life events and newborn DNA methylation

A Kotsakis Ruehlmann, S Sammallahti… - Molecular …, 2023 - nature.com
Prenatal maternal stressful life events are associated with adverse neurodevelopmental
outcomes in offspring. Biological mechanisms underlying these associations are largely …

A meta-analysis of immune-cell fractions at high resolution reveals novel associations with common phenotypes and health outcomes

Q Luo, VB Dwaraka, Q Chen, H Tong, T Zhu, K Seale… - Genome Medicine, 2023 - Springer
Background Changes in cell-type composition of tissues are associated with a wide range of
diseases and environmental risk factors and may be causally implicated in disease …

Cell-type heterogeneity: Why we should adjust for it in epigenome and biomarker studies

L Qi, AE Teschendorff - Clinical Epigenetics, 2022 - Springer
Most studies aiming to identify epigenetic biomarkers do so from complex tissues that are
composed of many different cell-types. By definition, these cell-types vary substantially in …