Molecular control of wood formation in trees

ZH Ye, R Zhong - Journal of experimental botany, 2015 - academic.oup.com
Wood (also termed secondary xylem) is the most abundant biomass produced by plants,
and is one of the most important sinks for atmospheric carbon dioxide. The development of …

Recent advances in the transcriptional regulation of secondary cell wall biosynthesis in the woody plants

J Zhang, M Xie, GA Tuskan, W Muchero… - Frontiers in Plant …, 2018 - frontiersin.org
Plant cell walls provide structural support for growth and serve as a barrier for pathogen
attack. Plant cell walls are also a source of renewable biomass for conversion to biofuels …

g: Profiler—a web server for functional interpretation of gene lists (2016 update)

J Reimand, T Arak, P Adler, L Kolberg… - Nucleic acids …, 2016 - academic.oup.com
Functional enrichment analysis is a key step in interpreting gene lists discovered in diverse
high-throughput experiments. g: Profiler studies flat and ranked gene lists and finds …

Cell-type-specific PtrWOX4a and PtrVCS2 form a regulatory nexus with a histone modification system for stem cambium development in Populus trichocarpa

X Dai, R Zhai, J Lin, Z Wang, D Meng, M Li, Y Mao… - Nature plants, 2023 - nature.com
Stem vascular cambium cells in forest trees produce wood for materials and energy. WOX4
affects the proliferation of such cells in Populus. Here we show that Ptr WOX4a is the most …

AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula

D Sundell, NR Street, M Kumar, EJ Mellerowicz… - The Plant …, 2017 - academic.oup.com
Trees represent the largest terrestrial carbon sink and a renewable source of ligno-cellulose.
There is significant scope for yield and quality improvement in these largely undomesticated …

The AREB1 Transcription Factor Influences Histone Acetylation to Regulate Drought Responses and Tolerance in Populus trichocarpa

S Li, YCJ Lin, P Wang, B Zhang, M Li, S Chen… - The Plant …, 2019 - academic.oup.com
Plants develop tolerance to drought by activating genes with altered levels of epigenetic
modifications. Specific transcription factors are involved in this activation, but the molecular …

Single‐cell RNA sequencing reveals a high‐resolution cell atlas of xylem in Populus

H Li, X Dai, X Huang, M Xu, Q Wang… - Journal of Integrative …, 2021 - Wiley Online Library
High‐throughput single‐cell RNA sequencing (scRNA‐seq) has advantages over traditional
RNA‐seq to explore spatiotemporal information on gene dynamic expressions in …

Biosynthesis and metabolic fate of phenylalanine in conifers

MB Pascual, J El-Azaz, FN de la Torre… - Frontiers in plant …, 2016 - frontiersin.org
The amino acid phenylalanine (Phe) is a critical metabolic node that plays an essential role
in the interconnection between primary and secondary metabolism in plants. Phe is used as …

[HTML][HTML] Woody plant cell walls: Fundamentals and utilization

W Li, YCJ Lin, YL Chen, C Zhou, S Li, N De Ridder… - Molecular Plant, 2024 - cell.com
Cell walls in plants, particularly forest trees, are the major carbon sink of the terrestrial
ecosystem. Chemical and biosynthetic features of plant cell walls were revealed early on …

Hierarchical Transcription Factor and Chromatin Binding Network for Wood Formation in Populus trichocarpa

H Chen, JP Wang, H Liu, H Li, YCJ Lin, R Shi… - The Plant …, 2019 - academic.oup.com
Wood remains the world's most abundant and renewable resource for timber and pulp and
is an alternative to fossil fuels. Understanding the molecular regulation of wood formation …