Defining HIV-1 transmission clusters based on sequence data
AS Hassan, OG Pybus, EJ Sanders, J Albert… - Aids, 2017 - journals.lww.com
Understanding HIV-1 transmission dynamics is relevant to both screening and intervention
strategies of HIV-1 infection. Commonly, HIV-1 transmission chains are determined based …
strategies of HIV-1 infection. Commonly, HIV-1 transmission chains are determined based …
Molecular epidemiology of HIV-1 infection in Europe: An overview
A Beloukas, A Psarris, P Giannelou, E Kostaki… - Infection, Genetics and …, 2016 - Elsevier
Abstract Human Immunodeficiency Virus type 1 (HIV-1) is characterised by vast genetic
diversity. Globally circulating HIV-1 viruses are classified into distinct phylogenetic strains …
diversity. Globally circulating HIV-1 viruses are classified into distinct phylogenetic strains …
HIV-1 transmitted drug resistance in newly diagnosed individuals in Italy over the period 2015–21
Background Transmitted drug resistance (TDR) is still a critical aspect for the management
of individuals living with HIV-1. Thus, its evaluation is crucial to optimize HIV care. Methods …
of individuals living with HIV-1. Thus, its evaluation is crucial to optimize HIV care. Methods …
HIV-1 transmission between MSM and heterosexuals, and increasing proportions of circulating recombinant forms in the Nordic Countries
J Esbjörnsson, M Mild, A Audelin, J Fonager… - Virus …, 2016 - academic.oup.com
Increased knowledge about HIV-1 transmission dynamics in different transmission groups
and geographical regions is fundamental for assessing and designing prevention efforts …
and geographical regions is fundamental for assessing and designing prevention efforts …
Post-migration acquisition of HIV: Estimates from four European countries, 2007 to 2016
Z Yin, AE Brown, BD Rice, G Marrone… - …, 2021 - eurosurveillance.org
Background The assumption that migrants acquire human immunodeficiency virus (HIV)
before migration, particularly those from high prevalence areas, is common. Aim We …
before migration, particularly those from high prevalence areas, is common. Aim We …
Virological failure in patients with HIV-1 subtype C receiving antiretroviral therapy: an analysis of a prospective national cohort in Sweden
A Häggblom, V Svedhem, K Singh, A Sönnerborg… - The lancet HIV, 2016 - thelancet.com
Background People with HIV-1 in low-income and middle-income countries increasingly
need second-line regimens with boosted protease inhibitors. However, data are scarce for …
need second-line regimens with boosted protease inhibitors. However, data are scarce for …
Increasing proportions of HIV-1 non-B subtypes and of NNRTI resistance between 2013 and 2016 in Germany: Results from the national molecular surveillance of …
A Hauser, A Hofmann, K Meixenberger, B Altmann… - PloS one, 2018 - journals.plos.org
Background Molecular surveillance of newly diagnosed HIV-infections is important for
tracking trends in circulating HIV-variants, including those with transmitted drug resistances …
tracking trends in circulating HIV-variants, including those with transmitted drug resistances …
Subtype‐independent near full‐length HIV‐1 genome sequencing and assembly to be used in large molecular epidemiological studies and clinical management
Abstract Introduction: HIV-1 near full-length genome (HIV-NFLG) sequencing from plasma is
an attractive multidimensional tool to apply in large-scale population-based molecular …
an attractive multidimensional tool to apply in large-scale population-based molecular …
Characteristics and spread to the native population of HIV-1 non-B subtypes in two European countries with high migration rate
K Dauwe, V Mortier, M Schauvliege… - BMC infectious …, 2015 - Springer
Background Non-B subtypes account for at least 50% of HIV-1 infections diagnosed in
Belgium and Luxembourg. They are considered to be acquired through heterosexual …
Belgium and Luxembourg. They are considered to be acquired through heterosexual …
Molecular epidemiology and HIV-1 variant evolution in Poland between 2015 and 2019
K Serwin, A Urbańska, K Scheibe, M Witak-Jędra… - Scientific reports, 2021 - nature.com
The occurrence of HIV-1 subtypes differs worldwide and within Europe, with non-B variants
mainly found across different exposure groups. In this study, we investigated the distribution …
mainly found across different exposure groups. In this study, we investigated the distribution …