BET-ting on chromatin-based therapeutics for heart failure

SM Haldar, TA McKinsey - Journal of molecular and cellular cardiology, 2014 - Elsevier
Studies of transcriptional mechanisms in heart failure have focused heavily on roles of
sequence-specific DNA-binding factors such as NFAT, MEF2 and GATA4. Recent findings …

The DNA modification N6-methyl-2'-deoxyadenosine (m6dA) drives activity-induced gene expression and is required for fear extinction

X Li, Q Zhao, W Wei, Q Lin, C Magnan, MR Emami… - Nature …, 2019 - nature.com
DNA modification is known to regulate experience-dependent gene expression. However,
beyond cytosine methylation and its oxidated derivatives, very little is known about the …

BRCA1-dependent transcriptional regulation: implication in tissue-specific tumor suppression

X Zhang, R Li - Cancers, 2018 - mdpi.com
Germ-line mutations in breast cancer susceptibility gene 1 (BRCA1) predominantly
predispose women to breast and ovarian cancers. BRCA1 is best known for its functions in …

RNA Pol II pausing facilitates phased pluripotency transitions by buffering transcription

A Abuhashem, AG Chivu, Y Zhao, EJ Rice… - Genes & …, 2022 - genesdev.cshlp.org
Abstract Promoter-proximal RNA Pol II pausing is a critical step in transcriptional control. Pol
II pausing has been predominantly studied in tissue culture systems. While Pol II pausing …

RNA polymerase II pausing factor NELF in CD8+ T cells promotes antitumor immunity

B Wu, X Zhang, HC Chiang, H Pan, B Yuan… - Nature …, 2022 - nature.com
Abstract T cell factor 1 (TCF1) is required for memory and stem-like CD8+ T cell functions.
How TCF1 partners with other transcription factors to regulate transcription remains unclear …

Dependency of NELF-E-SLUG-KAT2B epigenetic axis in breast cancer carcinogenesis

J Zhang, Z Hu, HH Chung, Y Tian, KW Lau… - Nature …, 2023 - nature.com
Cancer cells undergo transcriptional reprogramming to drive tumor progression and
metastasis. Using cancer cell lines and patient-derived tumor organoids, we demonstrate …

SIRT6-mediated transcriptional suppression of Txnip is critical for pancreatic beta cell function and survival in mice

K Qin, N Zhang, Z Zhang, M Nipper, Z Zhu, J Leighton… - Diabetologia, 2018 - Springer
Aims/hypothesis Better understanding of how genetic and epigenetic components control
beta cell differentiation and function is key to the discovery of novel therapeutic approaches …

Negative elongation factor (nelf) inhibits premature granulocytic development in zebrafish

M Huang, A Ahmed, W Wang, X Wang, C Ma… - International Journal of …, 2022 - mdpi.com
Gene expression is tightly regulated during hematopoiesis. Recent studies have suggested
that RNA polymerase II (Pol II) promoter proximal pausing, a temporary stalling downstream …

Analysis of time-series gene expression data to explore mechanisms of chemical-induced hepatic steatosis toxicity

A Aguayo-Orozco, FY Bois, S Brunak… - Frontiers in …, 2018 - frontiersin.org
Non-alcoholic fatty liver disease (NAFLD) represents a wide spectrum of disease, ranging
from simple fatty liver through steatosis with inflammation and necrosis to cirrhosis. One of …

The role of ZKSCAN3 in the transcriptional regulation of autophagy

H Pan, Y Yan, C Liu, T Finkel - Autophagy, 2017 - Taylor & Francis
Materials and methods Generation of zkscan3 knockout mice by the CRISPR/Cas9 method
zkscan3 knockout mice were generated using the CRISPR/Cas9 method as reported …