The RaPID platform for the discovery of pseudo-natural macrocyclic peptides

Y Goto, H Suga - Accounts of Chemical Research, 2021 - ACS Publications
Conspectus Although macrocyclic peptides bearing exotic building blocks have proven their
utility as pharmaceuticals, the sources of macrocyclic peptide drugs have been largely …

Introduction to thiopeptides: biological activity, biosynthesis, and strategies for functional reprogramming

AA Vinogradov, H Suga - Cell Chemical Biology, 2020 - cell.com
Thiopeptides (also known as thiazolyl peptides) are structurally complex natural products
with rich biological activities. Known for over 70 years for potent killing of Gram-positive …

Ribosome-mediated polymerization of long chain carbon and cyclic amino acids into peptides in vitro

J Lee, KJ Schwarz, DS Kim, JS Moore… - Nature …, 2020 - nature.com
Ribosome-mediated polymerization of backbone-extended monomers into polypeptides is
challenging due to their poor compatibility with the translation apparatus, which evolved to …

Ribosome-mediated biosynthesis of pyridazinone oligomers in vitro

J Lee, JN Coronado, N Cho, J Lim, BM Hosford… - Nature …, 2022 - nature.com
The ribosome is a macromolecular machine that catalyzes the sequence-defined
polymerization of L-α-amino acids into polypeptides. The catalysis of peptide bond formation …

Ribosomal elongation of aminobenzoic acid derivatives

T Katoh, H Suga - Journal of the American Chemical Society, 2020 - ACS Publications
2-Aminobenzoic acid and heterocyclic amino acids are aromatic homologues of β-amino
acids, but their chemical properties are quite distinct. Because of the poor nucleophilicity of …

Discovery of de novo macrocyclic peptides by messenger RNA display

H Peacock, H Suga - Trends in Pharmacological Sciences, 2021 - cell.com
Macrocyclic peptides are a promising class of compounds that can often engage
challenging therapeutic targets. Display technologies, such as mRNA display, allow for the …

Cavity-containing aromatic oligoamide foldamers and macrocycles: progress and future perspectives

TA Sobiech, Y Zhong, B Gong - Organic & Biomolecular Chemistry, 2022 - pubs.rsc.org
As a major class of foldamers, aromatic oligoamide foldamers have attracted intense
interest. The rigidity of aromatic residues and amide linkages allows the development of …

Tuning tRNAs for improved translation

JL Weiss, JC Decker, A Bolano, N Krahn - Frontiers in Genetics, 2024 - frontiersin.org
Transfer RNAs have been extensively explored as the molecules that translate the genetic
code into proteins. At this interface of genetics and biochemistry, tRNAs direct the efficiency …

Catalytic hairpin assembled polymeric tetrahedral DNA frameworks for MicroRNA imaging in live cells

Y Wang, Y Bai, LP Cao, LL Li, L Zhan, H Zuo… - Biosensors and …, 2022 - Elsevier
Dynamic DNA nanodevices-based assembly is currently well developed for a broad range
of analytical applications. However, some problems persist, such as false positives …

Engineering tRNAs for the Ribosomal Translation of Non-proteinogenic Monomers

M Sigal, S Matsumoto, A Beattie, T Katoh… - Chemical …, 2024 - ACS Publications
Ribosome-dependent protein biosynthesis is an essential cellular process mediated by
transfer RNAs (tRNAs). Generally, ribosomally synthesized proteins are limited to the 22 …