[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods

J Pawlowski, K Bruce, K Panksep, FI Aguirre… - Science of the Total …, 2022 - Elsevier
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …

Environmental paleomicrobiology: using DNA preserved in aquatic sediments to its full potential

E Capo, ME Monchamp, MJL Coolen… - Environmental …, 2022 - Wiley Online Library
In‐depth knowledge about spatial and temporal variation in microbial diversity and function
is needed for a better understanding of ecological and evolutionary responses to global …

Late Quaternary dynamics of Arctic biota from ancient environmental genomics

Y Wang, MW Pedersen, IG Alsos, B De Sanctis… - Nature, 2021 - nature.com
During the last glacial–interglacial cycle, Arctic biotas experienced substantial climatic
changes, yet the nature, extent and rate of their responses are not fully understood …

Postglacial species arrival and diversity buildup of northern ecosystems took millennia

IG Alsos, DP Rijal, D Ehrich, DN Karger, NG Yoccoz… - Science …, 2022 - science.org
What drives ecosystem buildup, diversity, and stability? We assess species arrival and
ecosystem changes across 16 millennia by combining regional-scale plant sedimentary …

Major shifts in biogeographic regions of freshwater fishes as evidence of the Anthropocene epoch

B Leroy, C Bellard, MS Dias, B Hugueny… - Science …, 2023 - science.org
Animals and plants worldwide are structured in global biogeographic regions, which were
shaped by major geologic forces during Earth history. Recently, humans have changed the …

[PDF][PDF] Investigating the effects of anthropogenic stressors on lake biota using sedimentary DNA

C Barouillet, ME Monchamp, S Bertilsson… - Freshwater …, 2022 - diva-portal.org
Analyses of sedimentary DNA (sedDNA) have increased exponentially over the last decade
and hold great potential to study the effects of anthropogenic stressors on lake biota over …

Plants, pollinators and their interactions under global ecological change: The role of pollen DNA metabarcoding

KL Bell, KJ Turo, A Lowe, K Nota, A Keller… - Molecular …, 2023 - Wiley Online Library
Anthropogenic activities are triggering global changes in the environment, causing entire
communities of plants, pollinators and their interactions to restructure, and ultimately leading …

Non-indigenous Cladocera (Crustacea: Branchiopoda): from a few notorious cases to a potential global faunal mixing in aquatic ecosystems

AA Kotov, DP Karabanov, K Van Damme - Water, 2022 - mdpi.com
Non-indigenous species may pose a threat to native ecosystems worldwide. In aquatic
environments, invasives may have a negative impact on human food security and …

Sedimentary ancient DNA shows terrestrial plant richness continuously increased over the Holocene in northern Fennoscandia

DP Rijal, PD Heintzman, Y Lammers, NG Yoccoz… - Science …, 2021 - science.org
The effects of climate change on species richness are debated but can be informed by the
past. Here, we generated a sedimentary ancient DNA dataset covering 10 lakes and applied …

Strengthening global-change science by integrating aeDNA with paleoecoinformatics

JW Williams, TL Spanbauer, PD Heintzman… - Trends in Ecology & …, 2023 - cell.com
Ancient environmental DNA (aeDNA) data are close to enabling insights into past global-
scale biodiversity dynamics at unprecedented taxonomic extent and resolution. However …