Enzymatic transition states and drug design

VL Schramm - Chemical reviews, 2018 - ACS Publications
Transition state theory teaches that chemically stable mimics of enzymatic transition states
will bind tightly to their cognate enzymes. Kinetic isotope effects combined with …

Genomic analysis of the human gut microbiome suggests novel enzymes involved in quinone biosynthesis

DA Ravcheev, I Thiele - Frontiers in microbiology, 2016 - frontiersin.org
Ubiquinone and menaquinone are membrane lipid-soluble carriers of electrons that are
essential for cellular respiration. Eukaryotic cells can synthesize ubiquinone but not …

Environmental metagenomic assemblies reveal seven new highly divergent chlamydial lineages and hallmarks of a conserved intracellular lifestyle

T Pillonel, C Bertelli, G Greub - Frontiers in microbiology, 2018 - frontiersin.org
The Chlamydiae phylum exclusively encompasses bacteria sharing a similar obligate
intracellular life cycle. Existing 16S rDNA data support a high diversity within the phylum …

Dynamic energy dependency of Chlamydia trachomatis on host cell metabolism during intracellular growth: Role of sodium-based energetics in chlamydial ATP …

P Liang, M Rosas-Lemus, D Patel, X Fang… - Journal of Biological …, 2018 - ASBMB
Chlamydia trachomatis is an obligate intracellular human pathogen responsible for the most
prevalent sexually-transmitted infection in the world. For decades C. trachomatis has been …

In silico functional annotation of hypothetical proteins from the Bacillus paralicheniformis strain Bac84 reveals proteins with biotechnological potentials and …

MA Rahman, UH Heme, MAK Parvez - Plos one, 2022 - journals.plos.org
Members of the Bacillus genus are industrial cell factories due to their capacity to secrete
significant quantities of biomolecules with industrial applications. The Bacillus …

Synthesis of erythrodiol C-ring derivatives and their activity against Chlamydia trachomatis

O Kazakova, L Rubanik, A Lobov, N Poleshchuk… - Steroids, 2021 - Elsevier
To develop new potential agents against Chlamydia trachomatis among oleanane type
triterpenoids the synthesis, spectral and X-ray analysis as well as antimicrobial screening of …

Protective efficacy of a hydroxy fatty acid against gastric Helicobacter infections

H Matsui, T Takahashi, SY Murayama… - …, 2017 - Wiley Online Library
Background We have previously revealed that omega‐3 polyunsaturated fatty acids can
prevent Helicobacter pylori infection by blocking the futalosine pathway, an alternative route …

Characterization and engineering of the biosynthesis gene cluster for antitumor macrolides PM100117 and PM100118 from a marine actinobacteria: generation of a …

RG Salcedo, C Olano, C Gómez, R Fernández… - Microbial cell …, 2016 - Springer
Background PM100117 and PM100118 are glycosylated polyketides with remarkable
antitumor activity, which derive from the marine symbiotic actinobacteria Streptomyces …

Narrow-spectrum inhibitors targeting an alternative menaquinone biosynthetic pathway of Helicobacter pylori

T Yamamoto, H Matsui, K Yamaji, T Takahashi… - Journal of Infection and …, 2016 - Elsevier
We aimed to identify narrow-spectrum natural compounds that specifically inhibit an
alternative menaquinone (MK; vitamin K2) biosynthetic pathway (the futalosine pathway) of …

Inhibition of the futalosine pathway for menaquinone biosynthesis suppresses Chlamydia trachomatis infection

BM Dudiak, TM Nguyen, D Needham, TC Outlaw… - FEBS …, 2021 - Wiley Online Library
Chlamydia trachomatis, an obligate intracellular bacterium with limited metabolic
capabilities, possesses the futalosine pathway for menaquinone biosynthesis. Futalosine …