Ecology and evolution of metabolic cross-feeding interactions in bacteria

G D'Souza, S Shitut, D Preussger, G Yousif… - Natural product …, 2018 - pubs.rsc.org
Literature covered: early 2000s to late 2017 Bacteria frequently exchange metabolites with
other micro-and macro-organisms. In these often obligate cross-feeding interactions, primary …

Implications of streamlining theory for microbial ecology

SJ Giovannoni, J Cameron Thrash… - The ISME …, 2014 - academic.oup.com
Whether a small cell, a small genome or a minimal set of chemical reactions with self-
replicating properties, simplicity is beguiling. As Leonardo da Vinci reportedly said,'simplicity …

Evolution and comparative genomics of the most common Trichoderma species

CP Kubicek, AS Steindorff, K Chenthamara… - BMC genomics, 2019 - Springer
Background The growing importance of the ubiquitous fungal genus Trichoderma
(Hypocreales, Ascomycota) requires understanding of its biology and evolution. Many …

Prochlorococcus: the structure and function of collective diversity

SJ Biller, PM Berube, D Lindell… - Nature Reviews …, 2015 - nature.com
The marine cyanobacterium Prochlorococcus is the smallest and most abundant
photosynthetic organism on Earth. In this Review, we summarize our understanding of the …

Extreme genome reduction in symbiotic bacteria

JP McCutcheon, NA Moran - Nature Reviews Microbiology, 2012 - nature.com
Since 2006, numerous cases of bacterial symbionts with extraordinarily small genomes
have been reported. These organisms represent independent lineages from diverse …

The Black Queen Hypothesis: evolution of dependencies through adaptive gene loss

JJ Morris, RE Lenski, ER Zinser - MBio, 2012 - Am Soc Microbiol
Reductive genomic evolution, driven by genetic drift, is common in endosymbiotic bacteria.
Genome reduction is less common in free-living organisms, but it has occurred in the …

SAR11 bacteria: the most abundant plankton in the oceans

SJ Giovannoni - Annual review of marine science, 2017 - annualreviews.org
SAR11 is a group of small, carbon-oxidizing bacteria that reach a global estimated
population size of 2.4× 1028 cells—approximately 25% of all plankton. They are found …

Single-Cell Genomics Reveals Hundreds of Coexisting Subpopulations in Wild Prochlorococcus

N Kashtan, SE Roggensack, S Rodrigue… - Science, 2014 - science.org
Extensive genomic diversity within coexisting members of a microbial species has been
revealed through selected cultured isolates and metagenomic assemblies. Yet, the cell-by …

Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage

CL Dupont, DB Rusch, S Yooseph… - The ISME …, 2012 - academic.oup.com
Bacteria in the 16S rRNA clade SAR86 are among the most abundant uncultivated
constituents of microbial assemblages in the surface ocean for which little genomic …

Genome streamlining in a cosmopolitan oceanic bacterium

SJ Giovannoni, HJ Tripp, S Givan, M Podar, KL Vergin… - science, 2005 - science.org
The SAR11 clade consists of very small, heterotrophic marine α-proteobacteria that are
found throughout the oceans, where they account for about 25% of all microbial cells …