Phylogenetic approaches for studying diversification

H Morlon - Ecology letters, 2014 - Wiley Online Library
Estimating rates of speciation and extinction, and understanding how and why they vary
over evolutionary time, geographical space and species groups, is a key to understanding …

Speciation through chromosomal fusion and fission in Lepidoptera

JM De Vos, H Augustijnen… - … Transactions of the …, 2020 - royalsocietypublishing.org
Changes in chromosome numbers may strongly affect reproductive barriers, because
individuals heterozygous for distinct karyotypes are typically expected to be at least partially …

An inverse latitudinal gradient in speciation rate for marine fishes

DL Rabosky, J Chang, PF Cowman, L Sallan… - Nature, 2018 - nature.com
Far more species of organisms are found in the tropics than in temperate and polar regions,
but the evolutionary and ecological causes of this pattern remain controversial 1, 2. Tropical …

Conceptual and statistical problems with the DEC+ J model of founder‐event speciation and its comparison with DEC via model selection

RH Ree, I Sanmartín - Journal of Biogeography, 2018 - Wiley Online Library
Phylogenetic studies of geographic range evolution are increasingly using statistical model
selection methods to choose among variants of the dispersal‐extinction‐cladogenesis …

Model selection in historical biogeography reveals that founder-event speciation is a crucial process in island clades

NJ Matzke - Systematic biology, 2014 - academic.oup.com
Founder-event speciation, where a rare jump dispersal event founds a new genetically
isolated lineage, has long been considered crucial by many historical biogeographers, but …

Impact of whole‐genome duplication events on diversification rates in angiosperms

JB Landis, DE Soltis, Z Li, HE Marx… - American journal of …, 2018 - Wiley Online Library
Premise of the Study Polyploidy or whole‐genome duplication (WGD) pervades the
evolutionary history of angiosperms. Despite extensive progress in our understanding of …

Detecting hidden diversification shifts in models of trait-dependent speciation and extinction

JM Beaulieu, BC O'Meara - Systematic biology, 2016 - academic.oup.com
The distribution of diversity can vary considerably from clade to clade. Attempts to
understand these patterns often employ state-dependent speciation and extinction models …

Model inadequacy and mistaken inferences of trait-dependent speciation

DL Rabosky, EE Goldberg - Systematic biology, 2015 - academic.oup.com
Species richness varies widely across the tree of life, and there is great interest in identifying
ecological, geographic, and other factors that affect rates of species proliferation. Recent …

The abiotic and biotic drivers of rapid diversification in A ndean bellflowers (Campanulaceae)

LP Lagomarsino, FL Condamine, A Antonelli… - New …, 2016 - Wiley Online Library
Summary The tropical Andes of South America, the world's richest biodiversity hotspot, are
home to many rapid radiations. While geological, climatic, and ecological processes …

Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis

RH Ree, SA Smith - Systematic biology, 2008 - academic.oup.com
In historical biogeography, model-based inference methods for reconstructing the evolution
of geographic ranges on phylogenetic trees are poorly developed relative to the diversity of …