Spatial transcriptomics of the respiratory system

S Megas, A Wilbrey-Clark, A Maartens… - Annual Review of …, 2024 - annualreviews.org
Over the last decade, single-cell genomics has revealed remarkable heterogeneity and
plasticity of cell types in the lungs and airways. The challenge now is to understand how …

[HTML][HTML] Novel Spatial Approaches to Dissect the Lung Cancer Immune Microenvironment

I Lubo, S Hernandez, II Wistuba, LM Solis Soto - Cancers, 2024 - mdpi.com
Lung cancer is a deadly disease with the highest rates of mortality. Over recent decades, a
better understanding of the biological mechanisms implicated in its pathogenesis has led to …

[HTML][HTML] Novel Integration of Spatial and Single-Cell Omics Data Sets Enables Deeper Insights into IPF Pathogenesis

F Wang, L Jin, X Wang, B Cui, Y Yang, L Duggan… - Proteomes, 2025 - mdpi.com
Idiopathic pulmonary fibrosis (IPF) is a progressive lung disease characterized by repetitive
alveolar injuries with excessive deposition of extracellular matrix (ECM) proteins. A crucial …

[HTML][HTML] Study on the Precise Evaluation of Environmental Impacts of Air Pollution in Cold Regions Using the Cost Control Method

C Li, D An, R Wang, H Zhang, W Liu, J Yao - Atmosphere, 2024 - mdpi.com
Objective: With the acceleration of industrialization, air pollution has become a global
environmental issue, particularly in cold regions where the unique climatic and geographical …

KLF6 in Pulmonary Hypertension: The Dual Role of Friend and Foe

R Alharbi, M Keles, N Fernandes, H Maude, A Fellows… - bioRxiv, 2024 - biorxiv.org
Background Pulmonary arterial hypertension (PAH) is a severe lung condition with unmet
clinical needs, marked by endothelial damage, excessive repair, and arterial narrowing …

Library size can undermine accurate molecular and phenotypic subtyping in spatial transcriptomics data.

NC Fisher, SB Malla, N Jamieson, PD Dunne - bioRxiv, 2024 - biorxiv.org
In an era where transcriptomics-based subtyping, phenotyping and mechanistic
understanding is increasingly being driven by state-of-the-art spatially resolved …