[HTML][HTML] Active inference on discrete state-spaces: A synthesis

L Da Costa, T Parr, N Sajid, S Veselic, V Neacsu… - Journal of Mathematical …, 2020 - Elsevier
Active inference is a normative principle underwriting perception, action, planning, decision-
making and learning in biological or artificial agents. From its inception, its associated …

[HTML][HTML] Great expectations: is there evidence for predictive coding in auditory cortex?

M Heilbron, M Chait - Neuroscience, 2018 - Elsevier
Predictive coding is possibly one of the most influential, comprehensive, and controversial
theories of neural function. While proponents praise its explanatory potential, critics object …

[HTML][HTML] A guide to group effective connectivity analysis, part 1: First level analysis with DCM for fMRI

P Zeidman, A Jafarian, N Corbin, ML Seghier, A Razi… - Neuroimage, 2019 - Elsevier
Abstract Dynamic Causal Modelling (DCM) is the predominant method for inferring effective
connectivity from neuroimaging data. In the 15 years since its introduction, the neural …

Altered excitatory and inhibitory neuronal subpopulation parameters are distinctly associated with tau and amyloid in Alzheimer's disease

KG Ranasinghe, P Verma, C Cai, X Xie, K Kudo, X Gao… - Elife, 2022 - elifesciences.org
Background: Neuronal-and circuit-level abnormalities of excitation and inhibition are shown
to be associated with tau and amyloid-beta (Aβ) in preclinical models of Alzheimer's disease …

[HTML][HTML] Dynamic causal modelling revisited

KJ Friston, KH Preller, C Mathys, H Cagnan, J Heinzle… - Neuroimage, 2019 - Elsevier
This paper revisits the dynamic causal modelling of fMRI timeseries by replacing the usual
(Taylor) approximation to neuronal dynamics with a neural mass model of the canonical …

Parcels and particles: Markov blankets in the brain

KJ Friston, ED Fagerholm, TS Zarghami, T Parr… - Network …, 2021 - direct.mit.edu
At the inception of human brain mapping, two principles of functional anatomy underwrote
most conceptions—and analyses—of distributed brain responses: namely, functional …

TAPAS: an open-source software package for translational neuromodeling and computational psychiatry

S Frässle, EA Aponte, S Bollmann… - Frontiers in …, 2021 - frontiersin.org
Psychiatry faces fundamental challenges with regard to mechanistically guided differential
diagnosis, as well as prediction of clinical trajectories and treatment response of individual …

Closed-form continuous-time neural networks

R Hasani, M Lechner, A Amini, L Liebenwein… - Nature Machine …, 2022 - nature.com
Continuous-time neural networks are a class of machine learning systems that can tackle
representation learning on spatiotemporal decision-making tasks. These models are …

Beyond the connectome: the dynome

NJ Kopell, HJ Gritton, MA Whittington, MA Kramer - Neuron, 2014 - cell.com
The human connectome will provide a detailed mapping of the brain's connectivity, with
fundamental insights for health and disease. However, further understanding of brain …

A systematic framework for functional connectivity measures

HE Wang, CG Bénar, PP Quilichini, KJ Friston… - Frontiers in …, 2014 - frontiersin.org
Various methods have been proposed to characterize the functional connectivity between
nodes in a network measured with different modalities (electrophysiology, functional …