The recent ascent of targeted covalent inhibitors (TCI) in drug discovery brings new opportunities and challenges to quantum chemical reactivity calculations supporting …
Q Cui, T Pal, L Xie - The Journal of Physical Chemistry B, 2021 - ACS Publications
QM/MM simulations have become an indispensable tool in many chemical and biochemical investigations. Considering the tremendous degree of success, including recognition by a …
KE Ranaghan, AJ Mulholland - International Reviews in Physical …, 2010 - Taylor & Francis
Combined quantum mechanics/molecular mechanics (QM/MM or QM-MM) methods are an excellent approach for modelling the mechanisms of enzyme-catalysed reactions. QM/MM …
The origin of the enzyme's powerful role in accelerating chemical reactions is one of the most critical and still widely discussed questions. It is already accepted that enzymes impose …
HIV-1 Protease (HIV-1 PR) is one of the three enzymes essential for the replication process of HIV-1 virus, which explains why it has been the main target for design of drugs against …
A Fernández-de-la-Pradilla, S Royo… - ACS …, 2023 - ACS Publications
Cathepsin L (CatL) is a lysosomal cysteine protease whose activity has been related to several human pathologies. However, although preclinical trials using CatL inhibitors were …
B Kim, R Snyder, M Nagaraju, Y Zhou… - Journal of chemical …, 2021 - ACS Publications
First-principles determination of free energy profiles for condensed-phase chemical reactions is hampered by the daunting costs associated with configurational sampling on ab …
The origin of enzyme catalysis remains a question of debate despite much intense study. We report a QM/MM theoretical study of the SN2 methyl transfer reaction catalyzed by a glycine …
Quantenmechanische/molekülmechanische (QM/MM‐) Verfahren sind die Methode der Wahl für die theoretische Behandlung reaktiver oder anderer elektronischer Prozesse in …