Modulation of cellular processes by histone and non-histone protein acetylation

M Shvedunova, A Akhtar - Nature reviews Molecular cell biology, 2022 - nature.com
Lysine acetylation is a widespread and versatile protein post-translational modification.
Lysine acetyltransferases and lysine deacetylases catalyse the addition or removal …

3D enhancer-promoter interactions and multi-connected hubs: Organizational principles and functional roles

CM Uyehara, E Apostolou - Cell reports, 2023 - cell.com
The spatiotemporal control of gene expression is dependent on the activity of cis-acting
regulatory sequences, called enhancers, which regulate target genes over variable genomic …

[HTML][HTML] Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project

J Dekker, F Alber, S Aufmkolk, BJ Beliveau… - Molecular cell, 2023 - cell.com
The four-dimensional nucleome (4DN) consortium studies the architecture of the genome
and the nucleus in space and time. We summarize progress by the consortium and highlight …

YY1-controlled regulatory connectivity and transcription are influenced by the cell cycle

JC Lam, NG Aboreden, SC Midla, S Wang, A Huang… - Nature Genetics, 2024 - nature.com
Few transcription factors have been examined for their direct roles in physically connecting
enhancers and promoters. Here acute degradation of Yin Yang 1 (YY1) in erythroid cells …

Heritable transcriptional defects from aberrations of nuclear architecture

S Papathanasiou, NA Mynhier, S Liu, G Brunette… - Nature, 2023 - nature.com
Transcriptional heterogeneity due to plasticity of the epigenetic state of chromatin
contributes to tumour evolution, metastasis and drug resistance,–. However, the …

Targeting histone acetylation dynamics and oncogenic transcription by catalytic P300/CBP inhibition

SJ Hogg, O Motorna, LA Cluse, TM Johanson… - Molecular cell, 2021 - cell.com
To separate causal effects of histone acetylation on chromatin accessibility and
transcriptional output, we used integrated epigenomic and transcriptomic analyses following …

RNA polymerase II is required for spatial chromatin reorganization following exit from mitosis

S Zhang, N Übelmesser, N Josipovic, G Forte… - Science …, 2021 - science.org
Mammalian chromosomes are three-dimensional entities shaped by converging and
opposing forces. Mitotic cell division induces marked chromosome condensation, but …

Mitotic bookmarking by SWI/SNF subunits

Z Zhu, X Chen, A Guo, T Manzano, PJ Walsh, KM Wills… - Nature, 2023 - nature.com
For cells to initiate and sustain a differentiated state, it is necessary that a 'memory'of this
state is transmitted through mitosis to the daughter cells,–. Mammalian switch/sucrose non …

[图书][B] RNA, the epicenter of genetic information

J Mattick, P Amaral - 2023 - library.oapen.org
The origin story and emergence of molecular biology is muddled. The early triumphs in
bacterial genetics and the complexity of animal and plant genomes complicate an intricate …

Epigenetic mechanisms to propagate histone acetylation by p300/CBP

M Kikuchi, S Morita, M Wakamori, S Sato… - Nature …, 2023 - nature.com
Histone acetylation is important for the activation of gene transcription but little is known
about its direct read/write mechanisms. Here, we report cryogenic electron microscopy …