Transformers in medical imaging: A survey
Following unprecedented success on the natural language tasks, Transformers have been
successfully applied to several computer vision problems, achieving state-of-the-art results …
successfully applied to several computer vision problems, achieving state-of-the-art results …
Transforming medical imaging with Transformers? A comparative review of key properties, current progresses, and future perspectives
Transformer, one of the latest technological advances of deep learning, has gained
prevalence in natural language processing or computer vision. Since medical imaging bear …
prevalence in natural language processing or computer vision. Since medical imaging bear …
Cellpose 2.0: how to train your own model
M Pachitariu, C Stringer - Nature methods, 2022 - nature.com
Pretrained neural network models for biological segmentation can provide good out-of-the-
box results for many image types. However, such models do not allow users to adapt the …
box results for many image types. However, such models do not allow users to adapt the …
Uctransnet: rethinking the skip connections in u-net from a channel-wise perspective with transformer
Most recent semantic segmentation methods adopt a U-Net framework with an encoder-
decoder architecture. It is still challenging for U-Net with a simple skip connection scheme to …
decoder architecture. It is still challenging for U-Net with a simple skip connection scheme to …
Medical transformer: Gated axial-attention for medical image segmentation
JMJ Valanarasu, P Oza, I Hacihaliloglu… - Medical image computing …, 2021 - Springer
Over the past decade, deep convolutional neural networks have been widely adopted for
medical image segmentation and shown to achieve adequate performance. However, due …
medical image segmentation and shown to achieve adequate performance. However, due …
Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning
A principal challenge in the analysis of tissue imaging data is cell segmentation—the task of
identifying the precise boundary of every cell in an image. To address this problem we …
identifying the precise boundary of every cell in an image. To address this problem we …
Segdiff: Image segmentation with diffusion probabilistic models
Diffusion Probabilistic Methods are employed for state-of-the-art image generation. In this
work, we present a method for extending such models for performing image segmentation …
work, we present a method for extending such models for performing image segmentation …
Medical image segmentation review: The success of u-net
Automatic medical image segmentation is a crucial topic in the medical domain and
successively a critical counterpart in the computer-aided diagnosis paradigm. U-Net is the …
successively a critical counterpart in the computer-aided diagnosis paradigm. U-Net is the …
Cellpose: a generalist algorithm for cellular segmentation
Many biological applications require the segmentation of cell bodies, membranes and nuclei
from microscopy images. Deep learning has enabled great progress on this problem, but …
from microscopy images. Deep learning has enabled great progress on this problem, but …
Segment anything model (sam) for digital pathology: Assess zero-shot segmentation on whole slide imaging
The segment anything model (SAM) was released as a foundation model for image
segmentation. The promptable segmentation model was trained by over 1 billion masks on …
segmentation. The promptable segmentation model was trained by over 1 billion masks on …