[HTML][HTML] What's new and what's next in diffusion MRI preprocessing

CMW Tax, M Bastiani, J Veraart, E Garyfallidis… - NeuroImage, 2022 - Elsevier
Diffusion MRI (dMRI) provides invaluable information for the study of tissue microstructure
and brain connectivity, but suffers from a range of imaging artifacts that greatly challenge the …

Prenatal stress and the developing brain: Risks for neurodevelopmental disorders

BRH Van den Bergh, R Dahnke… - Development and …, 2018 - cambridge.org
The prenatal period is increasingly considered as a crucial target for the primary prevention
of neurodevelopmental and psychiatric disorders. Understanding their pathophysiological …

Real-time deep pose estimation with geodesic loss for image-to-template rigid registration

SSM Salehi, S Khan, D Erdogmus… - IEEE transactions on …, 2018 - ieeexplore.ieee.org
With an aim to increase the capture range and accelerate the performance of state-of-the-art
inter-subject and subject-to-template 3-D rigid registration, we propose deep learning-based …

A detailed spatiotemporal atlas of the white matter tracts for the fetal brain

C Calixto, M Dorigatti Soldatelli, C Jaimes… - Proceedings of the …, 2025 - pnas.org
This study presents the construction of a comprehensive spatiotemporal atlas of white matter
tracts in the fetal brain for every gestational week between 23 and 36 wk using diffusion MRI …

[HTML][HTML] Fetal brain growth portrayed by a spatiotemporal diffusion tensor MRI atlas computed from in utero images

S Khan, L Vasung, B Marami, CK Rollins, O Afacan… - NeuroImage, 2019 - Elsevier
Altered structural fetal brain development has been linked to neuro-developmental
disorders. These structural alterations can be potentially detected in utero using diffusion …

Quantitative assessment of the susceptibility artefact and its interaction with motion in diffusion MRI

MS Graham, I Drobnjak, M Jenkinson, H Zhang - PloS one, 2017 - journals.plos.org
In this paper we evaluate the three main methods for correcting the susceptibility-induced
artefact in diffusion-weighted magnetic-resonance (DW-MR) data, and assess how …

[HTML][HTML] Deep learning-based parameter estimation in fetal diffusion-weighted MRI

D Karimi, C Jaimes, F Machado-Rivas, L Vasung… - Neuroimage, 2021 - Elsevier
Diffusion-weighted magnetic resonance imaging (DW-MRI) of fetal brain is challenged by
frequent fetal motion and signal to noise ratio that is much lower than non-fetal imaging. As a …

[HTML][HTML] Learning to estimate the fiber orientation distribution function from diffusion-weighted MRI

D Karimi, L Vasung, C Jaimes, F Machado-Rivas… - NeuroImage, 2021 - Elsevier
Estimation of white matter fiber orientation distribution function (fODF) is the essential first
step for reliable brain tractography and connectivity analysis. Most of the existing fODF …

Detailed anatomic segmentations of a fetal brain diffusion tensor imaging atlas between 23 and 30 weeks of gestation

C Calixto, F Machado‐Rivas, D Karimi… - Human brain …, 2023 - Wiley Online Library
This work presents detailed anatomic labels for a spatiotemporal atlas of fetal brain Diffusion
Tensor Imaging (DTI) between 23 and 30 weeks of post‐conceptional age. Additionally, we …

Harnessing the power of advanced fetal neuroimaging to understand in utero footprints for later neuropsychiatric disorders

J De Asis-Cruz, C Limperopoulos - Biological psychiatry, 2023 - Elsevier
Adverse intrauterine events may profoundly impact fetal risk for future adult diseases. The
mechanisms underlying this increased vulnerability are complex and remain poorly …