[HTML][HTML] Establishment of H3K9-methylated heterochromatin and its functions in tissue differentiation and maintenance

J Padeken, SP Methot, SM Gasser - Nature Reviews Molecular Cell …, 2022 - nature.com
Heterochromatin is characterized by dimethylated or trimethylated histone H3 Lys9
(H3K9me2 or H3K9me3, respectively) and is found at transposable elements, satellite …

[HTML][HTML] The self-organizing genome: principles of genome architecture and function

T Misteli - Cell, 2020 - cell.com
Genomes have complex three-dimensional architectures. The recent convergence of
genetic, biochemical, biophysical, and cell biological methods has uncovered several …

Nuclear compartmentalization as a mechanism of quantitative control of gene expression

P Bhat, D Honson, M Guttman - Nature Reviews Molecular Cell Biology, 2021 - nature.com
Gene regulation requires the dynamic coordination of hundreds of regulatory factors at
precise genomic and RNA targets. Although many regulatory factors have specific affinity for …

Methods for mapping 3D chromosome architecture

R Kempfer, A Pombo - Nature Reviews Genetics, 2020 - nature.com
Determining how chromosomes are positioned and folded within the nucleus is critical to
understanding the role of chromatin topology in gene regulation. Several methods are …

[HTML][HTML] Lamina-associated domains: links with chromosome architecture, heterochromatin, and gene repression

B Van Steensel, AS Belmont - Cell, 2017 - cell.com
In metazoan cell nuclei, hundreds of large chromatin domains are in close contact with the
nuclear lamina. Such lamina-associated domains (LADs) are thought to help organize …

[HTML][HTML] A LINE1-nucleolin partnership regulates early development and ESC identity

M Percharde, CJ Lin, Y Yin, J Guan, GA Peixoto… - Cell, 2018 - cell.com
Transposable elements represent nearly half of mammalian genomes and are generally
described as parasites, or" junk DNA." The LINE1 retrotransposon is the most abundant …

[HTML][HTML] Chromatin architecture reorganization during stem cell differentiation

JR Dixon, I Jung, S Selvaraj, Y Shen… - Nature, 2015 - nature.com
Higher-order chromatin structure is emerging as an important regulator of gene expression.
Although dynamic chromatin structures have been identified in the genome, the full scope of …

[HTML][HTML] Lamina-associated domains: peripheral matters and internal affairs

N Briand, P Collas - Genome biology, 2020 - Springer
At the nuclear periphery, associations of chromatin with the nuclear lamina through lamina-
associated domains (LADs) aid functional organization of the genome. We review the …

Lamin B1 loss is a senescence-associated biomarker

A Freund, RM Laberge, M Demaria… - Molecular biology of the …, 2012 - Am Soc Cell Biol
Cellular senescence is a potent tumor-suppressive mechanism that arrests cell proliferation
and has been linked to aging. However, studies of senescence have been impeded by the …

Lamins: nuclear intermediate filament proteins with fundamental functions in nuclear mechanics and genome regulation

Y Gruenbaum, R Foisner - Annual review of biochemistry, 2015 - annualreviews.org
Lamins are intermediate filament proteins that form a scaffold, termed nuclear lamina, at the
nuclear periphery. A small fraction of lamins also localize throughout the nucleoplasm …