Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium

RA González-Pech, TG Stephens, Y Chen… - BMC biology, 2021 - Springer
Background Dinoflagellates in the family Symbiodiniaceae are important photosynthetic
symbionts in cnidarians (such as corals) and other coral reef organisms. Breakdown of the …

Genomic approaches for conservation management in Australia under climate change

IR Onley, KE Moseby, JJ Austin - Life, 2021 - mdpi.com
Conservation genetics has informed threatened species management for several decades.
With the advent of advanced DNA sequencing technologies in recent years, it is now …

Big data in conservation genomics: Boosting skills, hedging bets, and staying current in the field

RM Schweizer, N Saarman, KM Ramstad… - Journal of …, 2021 - academic.oup.com
A current challenge in the fields of evolutionary, ecological, and conservation genomics is
balancing production of large-scale datasets with additional training often required to handle …

GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species

VE Kutschera, M Kierczak, T van der Valk, J von Seth… - BMC …, 2022 - Springer
Background Many wild species have suffered drastic population size declines over the past
centuries, which have led to 'genomic erosion'processes characterized by reduced genetic …

Navigating spaces between conservation research and practice: Are we making progress?

RM Jarvis, SB Borrelle, NJ Forsdick… - Ecological Solutions …, 2020 - Wiley Online Library
Despite aspirations for conservation impact, mismatches between research and
implementation have limited progress towards this goal. There is, therefore, an urgent need …

Population genomics of a predatory mammal reveals patterns of decline and impacts of exposure to toxic toads

B von Takach, L Ranjard, CP Burridge… - Molecular …, 2022 - Wiley Online Library
Mammal declines across northern Australia are one of the major biodiversity loss events
occurring globally. There has been no regional assessment of the implications of these …

Genomics reveals introgression and purging of deleterious mutations in the Arabian leopard (Panthera pardus nimr)

G Mochales-Riaño, C Fontsere, M de Manuel… - Iscience, 2023 - cell.com
In endangered species, low-genetic variation and inbreeding result from recent population
declines. Genetic screenings in endangered populations help to assess their vulnerability to …

Expanding the conservation genomics toolbox: incorporating structural variants to enhance genomic studies for species of conservation concern

J Wold, KP Koepfli, SJ Galla, D Eccles… - Molecular …, 2021 - Wiley Online Library
Structural variants (SVs) are large rearrangements (> 50 bp) within the genome that impact
gene function and the content and structure of chromosomes. As a result, SVs are a …

Restoring faith in conservation action: Maintaining wild genetic diversity through the Tasmanian devil insurance program

KA Farquharson, EA McLennan, Y Cheng, L Alexander… - Iscience, 2022 - cell.com
Conservation breeding programs aim to maintain 90% wild genetic diversity, but rarely
assess functional diversity. Here, we compare both genome-wide and functional diversity (in …

Genomic signatures of inbreeding in a critically endangered parrot, the kākāpō

Y Foster, L Dutoit, S Grosser, N Dussex, BJ Foster… - G3, 2021 - academic.oup.com
Events of inbreeding are inevitable in critically endangered species. Reduced population
sizes and unique life-history traits can increase the severity of inbreeding, leading to …