Recent understanding of soil acidobacteria and their ecological significance: a critical review

S Kalam, A Basu, I Ahmad, RZ Sayyed… - Frontiers in …, 2020 - frontiersin.org
Acidobacteria represents an underrepresented soil bacterial phylum whose members are
pervasive and copiously distributed across nearly all ecosystems. Acidobacterial sequences …

Roles, mechanism of action, and potential applications of sulfur-oxidizing bacteria for environmental bioremediation

PM Nguyen, PT Do, YB Pham, TO Doan… - Science of the Total …, 2022 - Elsevier
Sulfur (S) is a crucial component in the environment and living organisms. This work is the
first attempt to provide an overview and critical discussion on the roles, mechanisms, and …

Proposal to reclassify the proteobacterial classes Deltaproteobacteria and Oligoflexia, and the phylum Thermodesulfobacteria into four phyla reflecting major …

DW Waite, M Chuvochina, C Pelikan… - … of Systematic and …, 2020 - microbiologyresearch.org
The class Deltaproteobacteria comprises an ecologically and metabolically diverse group of
bacteria best known for dissimilatory sulphate reduction and predatory behaviour. Although …

Specialized metabolic functions of keystone taxa sustain soil microbiome stability

W Xun, Y Liu, W Li, Y Ren, W Xiong, Z Xu, N Zhang… - Microbiome, 2021 - Springer
Background The relationship between biodiversity and soil microbiome stability remains
poorly understood. Here, we investigated the impacts of bacterial phylogenetic diversity on …

Shotgun metagenomics reveals the benthic microbial community response to plastic and bioplastic in a coastal marine environment

LJ Pinnell, JW Turner - Frontiers in microbiology, 2019 - frontiersin.org
Plastic is incredibly abundant in marine environments but little is known about its effects on
benthic microbiota and biogeochemical cycling. This study reports the shotgun …

High diversity and functional potential of undescribed “Acidobacteriota” in Danish wastewater treatment plants

JM Kristensen, C Singleton, LA Clegg… - Frontiers in …, 2021 - frontiersin.org
Microbial communities in water resource recovery facilities encompass a large diversity of
poorly characterized lineages that could have undescribed process-critical functions …

Global diversity and inferred ecophysiology of microorganisms with the potential for dissimilatory sulfate/sulfite reduction

M Diao, S Dyksma, E Koeksoy, DK Ngugi… - FEMS Microbiology …, 2023 - academic.oup.com
Sulfate/sulfite-reducing microorganisms (SRM) are ubiquitous in nature, driving the global
sulfur cycle. A hallmark of SRM is the dissimilatory sulfite reductase encoded by the genes …

The bacterial sulfur cycle in expanding dysoxic and euxinic marine waters

DM van Vliet, FAB von Meijenfeldt… - Environmental …, 2021 - Wiley Online Library
Dysoxic marine waters (DMW,< 1 μM oxygen) are currently expanding in volume in the
oceans, which has biogeochemical, ecological and societal consequences on a global …

Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions

B Bayer, MA Saito, MR McIlvin, S Lücker… - The ISME …, 2021 - academic.oup.com
The genus Nitrospira is the most widespread group of nitrite-oxidizing bacteria and thrives in
diverse natural and engineered ecosystems. Nitrospira marina Nb-295T was isolated from …

Oxygen respiration and polysaccharide degradation by a sulfate-reducing acidobacterium

S Dyksma, M Pester - Nature communications, 2023 - nature.com
Sulfate-reducing microorganisms represent a globally important link between the sulfur and
carbon cycles. Recent metagenomic surveys expanded the diversity of microorganisms …