Advances in predicting subcellular localization of multi-label proteins and its implication for developing multi-target drugs

KC Chou - Current medicinal chemistry, 2019 - ingentaconnect.com
The smallest unit of life is a cell, which contains numerous protein molecules. Most of the
functions critical to the cell's survival are performed by these proteins located in its different …

A comparison and assessment of computational method for identifying recombination hotspots in Saccharomyces cerevisiae

H Yang, W Yang, FY Dao, H Lv, H Ding… - Briefings in …, 2020 - academic.oup.com
Meiotic recombination is one of the most important driving forces of biological evolution,
which is initiated by double-strand DNA breaks. Recombination has important roles in …

Crop prediction based on soil and environmental characteristics using feature selection techniques

A Suruliandi, G Mariammal, SP Raja - Mathematical and Computer …, 2021 - Taylor & Francis
Earlier, crop cultivation was undertaken on the basis of farmers' hands-on expertise.
However, climate change has begun to affect crop yields badly. Consequently, farmers are …

Progresses in predicting post-translational modification

KC Chou - International Journal of Peptide Research and …, 2020 - Springer
Identification of the sites of post-translational modifications (PTMs) in protein, RNA, and DNA
sequences is currently a very hot topic. This is because the information thus obtained is very …

iPPI-PseAAC (CGR): Identify protein-protein interactions by incorporating chaos game representation into PseAAC

J Jia, X Li, W Qiu, X Xiao, KC Chou - Journal of theoretical biology, 2019 - Elsevier
Investigation into the network of protein–protein interactions (PPIs) will provide valuable
insights into the inner workings of cells. Accordingly, it is crucially important to develop an …

[HTML][HTML] iPSW (2L)-PseKNC: A two-layer predictor for identifying promoters and their strength by hybrid features via pseudo K-tuple nucleotide composition

X Xiao, ZC Xu, WR Qiu, P Wang, HT Ge, KC Chou - Genomics, 2019 - Elsevier
The promoter is a regulatory DNA region about 81–1000 base pairs long, usually located
near the transcription start site (TSS) along upstream of a given gene. By combining a …

iRSpot-SPI: Deep learning-based recombination spots prediction by incorporating secondary sequence information coupled with physio-chemical properties via …

ZU Khan, F Ali, IA Khan, Y Hussain, D Pi - Chemometrics and Intelligent …, 2019 - Elsevier
Meiotic recombination plays an important role in the process of genetic diversity
generation.“Hotspots” are regions that show a higher rate of meiotic recombination, while …

Prediction of land suitability for crop cultivation based on soil and environmental characteristics using modified recursive feature elimination technique with various …

G Mariammal, A Suruliandi, SP Raja… - IEEE transactions on …, 2021 - ieeexplore.ieee.org
Crop cultivation prediction is an integral part of agriculture and is primarily based on factors
such as soil, environmental features like rainfall and temperature, and the quantum of …

[HTML][HTML] pLoc_bal-mHum: predict subcellular localization of human proteins by PseAAC and quasi-balancing training dataset

KC Chou, X Cheng, X Xiao - Genomics, 2019 - Elsevier
A cell contains numerous protein molecules. One of the fundamental goals in molecular cell
biology is to determine their subcellular locations since this information is extremely …

pLoc_bal-mVirus: predict subcellular localization of multi-label virus proteins by Chou's general PseAAC and IHTS treatment to balance training dataset

X Xiao, X Cheng, G Chen, QI Mao… - Medicinal …, 2019 - ingentaconnect.com
Background/Objective: Knowledge of protein subcellular localization is vitally important for
both basic research and drug development. Facing the avalanche of protein sequences …