The molecular basis for cellular function of intrinsically disordered protein regions

AS Holehouse, BB Kragelund - Nature Reviews Molecular Cell Biology, 2024 - nature.com
Intrinsically disordered protein regions exist in a collection of dynamic interconverting
conformations that lack a stable 3D structure. These regions are structurally heterogeneous …

[HTML][HTML] The functional importance of structure in unstructured protein regions

NE Davey - Current opinion in structural biology, 2019 - Elsevier
Highlights•IDRs exist as diverse and dynamic populations of interchanging structural
conformations.•Subsets of these conformations can have distinct functions.•Cell state …

The ambivalent role of proline residues in an intrinsically disordered protein: from disorder promoters to compaction facilitators

B Mateos, C Conrad-Billroth, M Schiavina… - Journal of molecular …, 2020 - Elsevier
Intrinsically disordered proteins (IDPs) carry out many biological functions. They lack a
stable three-dimensional structure, but rather adopt many different conformations in dynamic …

A proline switch explains kinetic heterogeneity in a coupled folding and binding reaction

F Zosel, D Mercadante, D Nettels, B Schuler - Nature communications, 2018 - nature.com
The interactions of intrinsically disordered proteins (IDPs) with their molecular targets are
essential for the regulation of many cellular processes. IDPs can perform their functions …

Affinity and specificity of motif-based protein–protein interactions

Y Ivarsson, P Jemth - Current opinion in structural biology, 2019 - Elsevier
It is becoming increasingly clear that eukaryotic cell physiology is largely controlled by
protein–protein interactions involving disordered protein regions, which usually interact with …

Frustration in fuzzy protein complexes leads to interaction versatility

MI Freiberger, PG Wolynes, DU Ferreiro… - The Journal of …, 2021 - ACS Publications
Disordered proteins frequently serve as interaction hubs involving a constrained variety of
partners. Complexes with different partners frequently exhibit distinct binding modes …

Classifying the binding modes of disordered proteins

M Fuxreiter - International Journal of Molecular Sciences, 2020 - mdpi.com
Disordered proteins often act as interaction hubs in cellular pathways, via the specific
recognition of a distinguished set of partners. While disordered regions can adopt a well …

Fold or not to fold upon binding—does it really matter?

M Fuxreiter - Current Opinion in Structural Biology, 2019 - Elsevier
Highlights•Suboptimal binding motifs lead to frustrated energy landscape.•Non-native,
transient contacts regulate heterogeneity in transition or bound state.•Alternative recognition …

[HTML][HTML] Modulation of allosteric coupling by mutations: from protein dynamics and packing to altered native ensembles and function

AN Naganathan - Current opinion in structural biology, 2019 - Elsevier
Highlights•Mutational effects are consistently felt beyond the first shell of
interactions.•Mutations modulate the dynamics and chemical shifts of distal …

The dynamics of linear polyubiquitin

A Jussupow, AC Messias, R Stehle, A Geerlof… - Science …, 2020 - science.org
Polyubiquitin chains are flexible multidomain proteins, whose conformational dynamics
enable them to regulate multiple biological pathways. Their dynamic is determined by the …