Importance of genetic diversity assessment in crop plants and its recent advances: an overview of its analytical perspectives

M Govindaraj, M Vetriventhan… - Genetics research …, 2015 - Wiley Online Library
The importance of plant genetic diversity (PGD) is now being recognized as a specific area
since exploding population with urbanization and decreasing cultivable lands are the critical …

Microsatellite markers: an overview of the recent progress in plants

RK Kalia, MK Rai, S Kalia, R Singh, AK Dhawan - Euphytica, 2011 - Springer
In recent years, molecular markers have been utilized for a variety of applications including
examination of genetic relationships between individuals, mapping of useful genes …

Current trends in microsatellite genotyping

E Guichoux, L Lagache, S Wagner… - Molecular ecology …, 2011 - Wiley Online Library
Microsatellites have been popular molecular markers ever since their advent in the late
eighties. Despite growing competition from new genotyping and sequencing techniques, the …

Genic microsatellite markers in plants: features and applications

RK Varshney, A Graner, ME Sorrells - TRENDS in Biotechnology, 2005 - cell.com
Expressed sequence tag (EST) projects have generated a vast amount of publicly available
sequence data from plant species; these data can be mined for simple sequence repeats …

An overview of molecular marker methods for plants

K Semagn, Å Bjørnstad, MN Ndjiondjop - African journal of biotechnology, 2006 - ajol.info
The development and use of molecular markers for the detection and exploitation of DNA
polymorphism is one of the most significant developments in the field of molecular genetics …

EST-SSRs as a resource for population genetic analyses

JR Ellis, JM Burke - Heredity, 2007 - nature.com
Simple-sequence repeats (SSRs) have increasingly become the marker of choice for
population genetic analyses. Unfortunately, the development of traditional 'anonymous' …

De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea …

Z Wang, B Fang, J Chen, X Zhang, Z Luo, L Huang… - BMC genomics, 2010 - Springer
Background The tuberous root of sweetpotato is an important agricultural and biological
organ. There are not sufficient transcriptomic and genomic data in public databases for …

Molecular markers from the transcribed/expressed region of the genome in higher plants

PK Gupta, S Rustgi - Functional & integrative genomics, 2004 - Springer
In recent years, molecular marker technology in higher plants has witnessed a shift from the
so-called random DNA markers (RDMs), developed in the past arbitrarily from genomic DNA …

Wheat genomics: present status and future prospects

PK Gupta, RR Mir, A Mohan… - International journal of …, 2008 - Wiley Online Library
Wheat (Triticum aestivum L.), with a large genome (16000 Mb) and high proportion (∼ 80%)
of repetitive sequences, has been a difficult crop for genomics research. However, the …

Interspecific transferability and comparative mapping of barley EST-SSR markers in wheat, rye and rice

RK Varshney, R Sigmund, A Börner, V Korzun, N Stein… - Plant Science, 2005 - Elsevier
Recent increase in the availability of expressed sequence tag (EST) data has facilitated the
development of microsatellite or simple sequence repeat (SSR) markers in a number of …