Lessons from mathematically modeling the NF‐κB pathway

S Basak, M Behar, A Hoffmann - Immunological reviews, 2012 - Wiley Online Library
Mathematical modeling has proved to be a critically important approach in the study of many
complex networks and dynamic systems in physics, engineering, chemistry, and biology …

[HTML][HTML] NF-κB and IRF pathways: cross-regulation on target genes promoter level

M Iwanaszko, M Kimmel - BMC genomics, 2015 - Springer
Abstract Background The NF-κB and IRF transcription factor families are major players in
inflammation and antiviral response and act as two major effectors of the innate immune …

Targeting chromatin remodeling in inflammation and fibrosis

J Yang, B Tian, AR Brasier - Advances in protein chemistry and structural …, 2017 - Elsevier
Mucosal surfaces of the human body are lined by a contiguous epithelial cell surface that
forms a barrier to aerosolized pathogens. Specialized pattern recognition receptors detect …

Distinct single-cell signaling characteristics are conferred by the MyD88 and TRIF pathways during TLR4 activation

Z Cheng, B Taylor, DR Ourthiague, A Hoffmann - Science signaling, 2015 - science.org
Toll-like receptors (TLRs) recognize specific pathogen–associated molecular patterns and
initiate innate immune responses through signaling pathways that depend on the adaptor …

Cell shape and the microenvironment regulate nuclear translocation of NF‐κB in breast epithelial and tumor cells

JE Sero, HZ Sailem, RC Ardy, H Almuttaqi… - Molecular systems …, 2015 - embopress.org
Although a great deal is known about the signaling events that promote nuclear
translocation of NF‐κB, how cellular biophysics and the microenvironment might regulate …

BRD4 couples NF-κB/RelA with airway inflammation and the IRF-RIG-I amplification loop in respiratory syncytial virus infection

B Tian, J Yang, Y Zhao, T Ivanciuc, H Sun… - Journal of …, 2017 - Am Soc Microbiol
The airway mucosa expresses protective interferon (IFN) and inflammatory cytokines in
response to respiratory syncytial virus (RSV) infection. In this study, we examine the role of …

[HTML][HTML] Macrophages employ quorum licensing to regulate collective activation

JJ Muldoon, Y Chuang, N Bagheri… - Nature communications, 2020 - nature.com
Macrophage-initiated inflammation is tightly regulated to eliminate threats such as infections
while suppressing harmful immune activation. However, individual cells' signaling …

Systematic analysis of cell-type differences in the epithelial secretome reveals insights into the pathogenesis of respiratory syncytial virus–induced lower respiratory …

Y Zhao, M Jamaluddin, Y Zhang, H Sun… - The Journal of …, 2017 - journals.aai.org
Lower respiratory tract infections from respiratory syncytial virus (RSV) are due, in part, to
secreted signals from lower airway cells that modify the immune response and trigger airway …

RelA Ser276 phosphorylation-coupled Lys310 acetylation controls transcriptional elongation of inflammatory cytokines in respiratory syncytial virus infection

AR Brasier, B Tian, M Jamaluddin, MK Kalita… - Journal of …, 2011 - Am Soc Microbiol
Respiratory syncytial virus (RSV) is a negative-sense single-stranded RNA virus responsible
for lower respiratory tract infections (LRTIs) in humans. In experimental models of RSV LRTI …

[HTML][HTML] The NFκB subunit RELA is a master transcriptional regulator of the committed epithelial-mesenchymal transition in airway epithelial cells

B Tian, SG Widen, J Yang, TG Wood, A Kudlicki… - Journal of Biological …, 2018 - ASBMB
The epithelial-mesenchymal transition (EMT) is a multistep dedifferentiation program
important in tissue repair. Here, we examined the role of the transcriptional regulator NF-κB …