PRC2-RNA interactions: Viewpoint from Tom Cech, Chen Davidovich, and Richard Jenner

TR Cech, C Davidovich, RG Jenner - Molecular Cell, 2024 - cell.com
Diverse biochemical, structural, and in vivo data support models for the regulation of
polycomb repressive complex 2 (PRC2) activity by RNAs, which may contribute to the …

PRC2-RNA interactions: Viewpoint from YongWoo Lee and Jeannie T. Lee

YW Lee, JT Lee - Molecular Cell, 2024 - cell.com
Here, we expound on the view that Xist RNA directly controls Polycomb repressive complex
2 (PRC2) recruitment, off-loading to chromatin, catalytic activity, and eviction from chromatin …

Identification of G-quadruplex nucleic acid structures by high-throughput sequencing: A review

D Song, J Luo, X Duan, F Jin, YJ Lu - International Journal of Biological …, 2025 - Elsevier
Abstract G-quadruplexes (G4s) are non-canonical nucleic acid secondary structures formed
by guanine-rich DNA or RNA sequences. These structures play pivotal roles in cellular …

Recruitment of chromatin remodelers by XIST B-repeat region is variably dependent on HNRNPK

MJ Navarro-Cobos, CJ Brown - Human Molecular Genetics, 2024 - academic.oup.com
X-chromosome inactivation is triggered by the long non-coding RNA XIST, whose structure
is characterized by tandem repeats that modularly recruit different proteins and chromatin …

A guide to RNA structure analysis and RNA‐targeting methods

R Aguilar, C Mardones, AA Moreno… - The FEBS …, 2024 - Wiley Online Library
RNAs are increasingly recognized as promising therapeutic targets, susceptible to
modulation by strategies that include targeting with small molecules, antisense …

Diverse RNA Structures Induce PRC2 Dimerization and Inhibit Histone Methyltransferase Activity

J Song, L Yao, AR Gooding, V Thron, V Kasinath… - bioRxiv, 2024 - biorxiv.org
Methyltransferase PRC2 (Polycomb Repressive Complex 2) introduces histone H3K27
trimethylation, a repressive chromatin mark, to tune the differential expression of genes …

[HTML][HTML] SVALKA: A Long Noncoding Cis-Natural Antisense RNA That Plays a Role in the Regulation of the Cold Response of Arabidopsis thaliana

NM Kiger, SJ Schroeder - Non-Coding RNA, 2024 - mdpi.com
RNA plays important roles in the regulation of gene expression in response to
environmental stimuli. SVALKA, a long noncoding cis-natural antisense RNA, is a key …

[HTML][HTML] Re-analysis of CLAP data affirms PRC2 as an RNA binding protein

YW Lee, R Blum, M Rosenberg, JT Lee - bioRxiv, 2024 - pmc.ncbi.nlm.nih.gov
Using halo-tagged PRC2 and “CLAP” methodology, Guo et al. recently came to the
conclusion that PRC2 is not an RNA binding protein (RBP). They suggested that previous …

[HTML][HTML] Protocol for mapping RNA G-quadruplex for chromatin-bound RNA using d-rG4-seq

YW Lee, V Levy, JT Lee - STAR protocols, 2024 - Elsevier
Here, we present a protocol for using d-rG4-seq, a technique for mapping RNA G-
quadruplex (rG4) for chromatin-bound RNA. We describe steps for identifying in vivo rG4 …

Combination of human and mouse XIST domains generates a minimal functional XIST

MJ Navarro Cobos - 2024 - open.library.ubc.ca
X-chromosome inactivation (XCI) is an essential process in eutherian mammals to
compensate dosage between females and males. XCI is triggered by XIST, a long non …