[HTML][HTML] APOBECs and virus restriction

RS Harris, JP Dudley - Virology, 2015 - Elsevier
The APOBEC family of single-stranded DNA cytosine deaminases comprises a formidable
arm of the vertebrate innate immune system. Pre-vertebrates express a single APOBEC …

HIV restriction factors and mechanisms of evasion

MH Malim, PD Bieniasz - Cold Spring …, 2012 - perspectivesinmedicine.cshlp.org
Retroviruses have long been a fertile model for discovering host–pathogen interactions and
their associated biological principles and processes. These advances have not only …

Signatures of environmental genetic adaptation pinpoint pathogens as the main selective pressure through human evolution

M Fumagalli, M Sironi, U Pozzoli… - PLoS …, 2011 - journals.plos.org
Previous genome-wide scans of positive natural selection in humans have identified a
number of non-neutrally evolving genes that play important roles in skin pigmentation …

Rules of engagement: molecular insights from host-virus arms races

MD Daugherty, HS Malik - Annual review of genetics, 2012 - annualreviews.org
Mammalian genes and genomes have been shaped by ancient and ongoing challenges
from viruses. These genetic imprints can be identified via evolutionary analyses to reveal …

Evolutionary conflicts between viruses and restriction factors shape immunity

NK Duggal, M Emerman - Nature Reviews Immunology, 2012 - nature.com
Host restriction factors are potent, widely expressed intracellular blocks to viral replication
that are an important component of the innate immune response to viral infection. However …

Gene expression variability across cells and species shapes innate immunity

T Hagai, X Chen, RJ Miragaia, R Rostom, T Gomes… - Nature, 2018 - nature.com
As the first line of defence against pathogens, cells mount an innate immune response,
which varies widely from cell to cell. The response must be potent but carefully controlled to …

Studies of endogenous retroviruses reveal a continuing evolutionary saga

JP Stoye - Nature Reviews Microbiology, 2012 - nature.com
Retroviral replication involves the formation of a DNA provirus integrated into the host
genome. Through this process, retroviruses can colonize the germ line to form endogenous …

Reappraisal of known malaria resistance loci in a large multicenter study

Nature genetics, 2014 - nature.com
Many human genetic associations with resistance to malaria have been reported, but few
have been reliably replicated. We collected data on 11,890 cases of severe malaria due to …

To TRIM the immunity: from innate to adaptive immunity

W Yang, Z Gu, H Zhang, H Hu - Frontiers in immunology, 2020 - frontiersin.org
The tripartite motif (TRIM) proteins have been intensively studied as essential modulators in
various biological processes, especially in regulating a wide range of signaling pathways …

The evolutionary conundrum of pathogen mimicry

NC Elde, HS Malik - Nature reviews microbiology, 2009 - nature.com
Evolutionary conflicts involving mimicry are found throughout nature. Diverse pathogens
produce a range of'mimics' that resemble host components in both form and function. Such …