Genotypic resistance testing of HIV-1 DNA in peripheral blood mononuclear cells

C Chu, D Armenia, C Walworth… - Clinical Microbiology …, 2022 - Am Soc Microbiol
SUMMARY HIV-1 DNA exists in nonintegrated linear and circular episomal forms and as
integrated proviruses. In patients with plasma viremia, most peripheral blood mononuclear …

Deep sequencing: becoming a critical tool in clinical virology

ME Quiñones-Mateu, S Avila, G Reyes-Teran… - Journal of clinical …, 2014 - Elsevier
Population (Sanger) sequencing has been the standard method in basic and clinical DNA
sequencing for almost 40 years; however, next-generation (deep) sequencing …

Human immunodeficiency virus drug resistance: 2018 recommendations of the International Antiviral Society–USA Panel

HF Günthard, V Calvez, R Paredes… - Clinical Infectious …, 2019 - academic.oup.com
Background Contemporary antiretroviral therapies (ART) and management strategies have
diminished both human immunodeficiency virus (HIV) treatment failure and the acquired …

Accumulation of multiple mutations in vivo confers cross-resistance to new and existing integrase inhibitors

WW Zhang, PK Cheung, N Oliveira… - The Journal of …, 2018 - academic.oup.com
Bictegravir (BIC) and cabotegravir (CAB) are the latest available HIV integrase inhibitors in
clinical trials. The combination of major integrase inhibitor substitutions G140S/Q148H has …

Discordance between hiv-1 population in plasma at rebound after structured treatment interruption and archived provirus population in peripheral blood mononuclear …

CM Hendricks, MN Cash, MS Tagliamonte… - Microbiology …, 2022 - Am Soc Microbiol
Antiretroviral therapy (ART) can sustain the suppression of plasma viremia to below
detection levels. Infected individuals undergoing a treatment interruption exhibit rapid viral …

Lack of concordance between residual viremia and viral variants driving de novo infection of CD4+ T cells on ART

MC Puertas, M Noguera-Julian, M Massanella, C Pou… - Retrovirology, 2016 - Springer
Background In most patients, current antiretroviral therapy (ART) regimens can rapidly
reduce plasma viral load. However, even after years of effective treatment, a significant …

Sensitive testing of plasma HIV-1 RNA and Sanger sequencing of cellular HIV-1 DNA for the detection of drug resistance prior to starting first-line antiretroviral therapy …

AM Geretti, T Conibear, A Hill… - Journal of …, 2014 - academic.oup.com
Objectives This study investigated strategies that may increase the yield of drug resistance
testing prior to starting antiretroviral therapy (ART), and whether transmitted and …

Identification of minority resistance mutations in the HIV-1 integrase coding region using next generation sequencing

J Fonager, JT Larsson, C Hussing, FN Engsig… - Journal of Clinical …, 2015 - Elsevier
Background The current widely applied standard method to screen for HIV-1 genotypic
resistance is based on Sanger population sequencing (Sseq), which does not allow for the …

HIV-1C proviral DNA for detection of drug resistance mutations

K Huruy, A Mulu, UG Liebert, M Melanie - PLoS One, 2018 - journals.plos.org
Background Using HIV proviral DNA as a template may be suitable for initial detection of
transmitted drug resistance mutations (TDRMs) as it is easy to handle and less expensive …

HIV-1 DNA Testing in Viremic Patients Identifies More Drug Resistance Than HIV-1 RNA Testing

D Curanovic, SK Martens, MA Rodriguez… - Open Forum …, 2023 - academic.oup.com
Abstract Background The Department of Health and Human Services HIV-1 Treatment
Guidelines recommend drug resistance testing in HIV-1 RNA to guide the selection of …