Fight hard or die trying: when plants face pathogens under heat stress

H Desaint, N Aoun, L Deslandes, F Vailleau… - New …, 2021 - Wiley Online Library
In their natural environment, plants are exposed to biotic or abiotic stresses that occur
sequentially or simultaneously. Plant responses to these stresses have been studied widely …

Host–parasite co-evolution and its genomic signature

D Ebert, PD Fields - Nature Reviews Genetics, 2020 - nature.com
Studies in diverse biological systems have indicated that host–parasite co-evolution is
responsible for the extraordinary genetic diversity seen in some genomic regions, such as …

Genome-wide association studies in plant pathosystems: success or failure?

C Demirjian, F Vailleau, R Berthomé, F Roux - Trends in plant science, 2023 - cell.com
Harnessing natural genetic variation is an established alternative to artificial genetic
variation for investigating the molecular dialog between partners in plant pathosystems …

Creation and judicious application of a wheat resistance gene atlas

AN Hafeez, S Arora, S Ghosh, D Gilbert, RL Bowden… - Molecular Plant, 2021 - cell.com
Disease-resistance (R) gene cloning in wheat (Triticum aestivum) has been accelerated by
the recent surge of genomic resources, facilitated by advances in sequencing technologies …

Population genetics in the human microbiome

NR Garud, KS Pollard - Trends in Genetics, 2020 - cell.com
While the human microbiome's structure and function have been extensively studied, its
within-species genetic diversity is less well understood. However, genetic mutations in the …

Genome‐wide association studies on the phyllosphere microbiome: embracing complexity in host–microbe interactions

K Beilsmith, MPM Thoen, B Brachi, AD Gloss… - The Plant …, 2019 - Wiley Online Library
Environmental sequencing shows that plants harbor complex communities of microbes that
vary across environments. However, many approaches for mapping plant genetic variation …

The Genetic Architecture of Adaptation to Leaf and Root Bacterial Microbiota in Arabidopsis thaliana

F Roux, L Frachon, C Bartoli - Molecular Biology and Evolution, 2023 - academic.oup.com
Understanding the role of the host genome in modulating microbiota variation is a need to
shed light on the holobiont theory and overcome the current limits on the description of host …

Xanthomonas arboricola pv. juglandis and pv. corylina: Brothers or distant relatives? Genetic clues, epidemiology, and insights for disease management

M Kałużna, M Fischer‐Le Saux… - Molecular Plant …, 2021 - Wiley Online Library
Abstract Background The species Xanthomonas arboricola comprises up to nine pathovars,
two of which affect nut crops: pv. juglandis, the causal agent of walnut bacterial blight, brown …

Fast and flexible linear mixed models for genome-wide genetics

DE Runcie, L Crawford - PLoS genetics, 2019 - journals.plos.org
Linear mixed effect models are powerful tools used to account for population structure in
genome-wide association studies (GWASs) and estimate the genetic architecture of complex …

PMR 5, an acetylation protein at the intersection of pectin biosynthesis and defense against fungal pathogens

D Chiniquy, W Underwood, J Corwin, A Ryan… - The Plant …, 2019 - Wiley Online Library
Powdery mildew (Golovinomyces cichoracearum), one of the most prolific obligate
biotrophic fungal pathogens worldwide, infects its host by penetrating the plant cell wall …