Integrating fossil observations into phylogenetics using the fossilized birth–death model

AM Wright, DW Bapst, J Barido-Sottani… - Annual Review of …, 2022 - annualreviews.org
Over the past decade, a new set of methods for estimating dated trees has emerged.
Originally referred to as the fossilized birth–death (FBD) process, this single model has …

[HTML][HTML] Craniodental morphology and phylogeny of marsupials

RMD Beck, RS Voss, SA Jansa - Bulletin of the American Museum of …, 2022 - BioOne
The current literature on marsupial phylogenetics includes numerous studies based on
analyses of morphological data with limited sampling of Recent and fossil taxa, and many …

[HTML][HTML] Total evidence phylogeny of platyrrhine primates and a comparison of undated and tip-dating approaches

RMD Beck, D de Vries, MC Janiak, IB Goodhead… - Journal of Human …, 2023 - Elsevier
There have been multiple published phylogenetic analyses of platyrrhine primates (New
World monkeys) using both morphological and molecular data, but relatively few that have …

Phylogeny, evolution, and classification of the ant genus Lasius, the tribe Lasiini and the subfamily Formicinae (Hymenoptera: Formicidae)

BE Boudinot, ML Borowiec… - Systematic …, 2022 - Wiley Online Library
Within the Formicidae, the higher classification of nearly all subfamilies has been recently
revised given the findings of molecular phylogenetics. Here, we integrate morphology and …

The age of insects and the revival of the minimum age tree

S Klopfstein - Austral Entomology, 2021 - Wiley Online Library
Deriving node calibrations from fossils remains by far the most common method for attaching
an absolute timescale to a molecular tree. But this' node dating'approach has a credibility …

The fundamental role of character coding in Bayesian morphological phylogenetics

B Khakurel, C Grigsby, TD Tran, J Zariwala… - Systematic …, 2024 - academic.oup.com
Phylogenetic trees establish a historical context for the study of organismal form and
function. Most phylogenetic trees are estimated using a model of evolution. For molecular …

Inferring the total-evidence timescale of marattialean fern evolution in the face of model sensitivity

MR May, DL Contreras, MA Sundue… - Systematic …, 2021 - academic.oup.com
Phylogenetic divergence-time estimation has been revolutionized by two recent
developments: 1) total-evidence dating (or" tip-dating") approaches that allow for the …

Evolution and systematics of the Aculeata and kin (Hymenoptera), with emphasis on the ants (Formicoidea:†@@@ idae fam. nov., Formicidae)

BE Boudinot, Z Khouri, A Richter, ZH Griebenow… - BioRxiv, 2022 - biorxiv.org
Fossils provide unique opportunity to understand the tempo and mode of evolution and are
essential for modeling the history of lineage diversification. Here, we interrogate the …

Ignoring fossil age uncertainty leads to inaccurate topology and divergence time estimates in time calibrated tree inference

J Barido-Sottani, NMA Van Tiel, MJ Hopkins… - Frontiers in Ecology …, 2020 - frontiersin.org
Time calibrated trees are challenging to estimate for many extinct groups of species due to
the incompleteness of the rock and fossil records. Additionally, the precise age of a sample …

[图书][B] Understanding the tripartite approach to Bayesian divergence time estimation

RCM Warnock, AM Wright - 2020 - cambridge.org
Placing evolutionary events in the context of geological time is a fundamental goal in
paleobiology and macroevolution. In this Element we describe the tripartite model used for …