NOREVA: enhanced normalization and evaluation of time-course and multi-class metabolomic data

Q Yang, Y Wang, Y Zhang, F Li, W Xia… - Nucleic acids …, 2020 - academic.oup.com
Biological processes (like microbial growth & physiological response) are usually dynamic
and require the monitoring of metabolic variation at different time-points. Moreover, there is …

Systematic synergy modeling: understanding drug synergy from a systems biology perspective

D Chen, X Liu, Y Yang, H Yang, P Lu - BMC systems biology, 2015 - Springer
Owing to drug synergy effects, drug combinations have become a new trend in combating
complex diseases like cancer, HIV and cardiovascular diseases. However, conventional …

Vaccinology in the era of high-throughput biology

HI Nakaya, B Pulendran - Philosophical Transactions of …, 2015 - royalsocietypublishing.org
Vaccination has been tremendously successful saving lives and preventing infections.
However, the development of vaccines against global pandemics such as HIV, malaria and …

[HTML][HTML] Distinct amino acid and lipid perturbations characterize acute versus chronic malaria

RJ Cordy, R Patrapuvich, LN Lili, M Cabrera-Mora… - JCI insight, 2019 - ncbi.nlm.nih.gov
Chronic malaria is a major public health problem and significant challenge for disease
eradication efforts. Despite its importance, the biological factors underpinning chronic …

Malaria vaccine clinical trials: what's on the horizon

A Moreno, C Joyner - Current opinion in immunology, 2015 - Elsevier
Highlights•Progress towards a P. falciparum malaria vaccine continues with the completion
of several clinical trials.•Plasmodium vivax vaccine development needs to be prioritized and …

MaHPIC malaria systems biology data from Plasmodium cynomolgi sporozoite longitudinal infections in macaques

JD DeBarry, MV Nural, SB Pakala, V Nayak… - Scientific data, 2022 - nature.com
Plasmodium cynomolgi causes zoonotic malarial infections in Southeast Asia and this
parasite species is important as a model for Plasmodium vivax and Plasmodium ovale. Each …

mGAP: the macaque genotype and phenotype resource, a framework for accessing and interpreting macaque variant data, and identifying new models of human …

BN Bimber, MY Yan, SM Peterson, B Ferguson - BMC genomics, 2019 - Springer
Abstract Background Non-human primates (NHPs), particularly macaques, serve as critical
and highly relevant pre-clinical models of human disease. The similarity in human and …

Analysis of erythrocyte dynamics in Rhesus macaque monkeys during infection with Plasmodium cynomolgi

LL Fonseca, CJ Joyner, CL Saney… - Malaria journal, 2018 - Springer
Background Malaria is a major mosquito transmitted, blood-borne parasitic disease that
afflicts humans. The disease causes anaemia and other clinical complications, which can …

Metabolic profiling during malaria reveals the role of the aryl hydrocarbon receptor in regulating kidney injury

MM Lissner, K Cumnock, NM Davis, JG Vilches-Moure… - Elife, 2020 - elifesciences.org
Systemic metabolic reprogramming induced by infection exerts profound, pathogen-specific
effects on infection outcome. Here, we detail the host immune and metabolic response …

Multi-omics analysis reveals changes in tryptophan and cholesterol metabolism before and after sexual maturation in captive macaques

X Liu, X Liu, X Wang, K Shang, J Li, Y Lan, J Wang, J Li… - BMC genomics, 2023 - Springer
Abstract Rhesus macaques (Macaca mulatta, RMs) are widely used in sexual maturation
studies due to their high genetic and physiological similarity to humans. However, judging …