Selection signatures in livestock genome: A review of concepts, approaches and applications

KA Saravanan, M Panigrahi, H Kumar, B Bhushan… - Livestock Science, 2020 - Elsevier
Livestock populations have been consistently improving in terms of performance and
productivity by selective breeding over the centuries. These selection strategies are …

Global dispersal and adaptive evolution of domestic cattle: a genomic perspective

X Xia, K Qu, Y Wang, MHS Sinding, F Wang, Q Hanif… - Stress Biology, 2023 - Springer
Domestic cattle have spread across the globe and inhabit variable and unpredictable
environments. They have been exposed to a plethora of selective pressures and have …

Signatures of selection reveal candidate genes involved in economic traits and cold acclimation in five Swedish cattle breeds

SM Ghoreishifar, S Eriksson, AM Johansson… - Genetics Selection …, 2020 - Springer
Background Thousands of years of natural and artificial selection have resulted in
indigenous cattle breeds that are well-adapted to the environmental challenges of their local …

Scans for signatures of selection in Russian cattle breed genomes reveal new candidate genes for environmental adaptation and acclimation

AA Yurchenko, HD Daetwyler, N Yudin, RD Schnabel… - Scientific reports, 2018 - nature.com
Domestication and selective breeding has resulted in over 1000 extant cattle breeds. Many
of these breeds do not excel in important traits but are adapted to local environments. These …

Comprehensive selection signature analyses in dairy cattle exploiting purebred and crossbred genomic data

SS Nayak, M Panigrahi, D Rajawat, K Ghildiyal… - Mammalian …, 2023 - Springer
The main objective of the current research was to locate, annotate, and highlight specific
areas of the bovine genome that are undergoing intense positive selection. Here, we are …

Genetic Diversity and Signatures of Selection for Thermal Stress in Cattle and Other Two Bos Species Adapted to Divergent Climatic Conditions

PHF Freitas, Y Wang, P Yan, HR Oliveira… - Frontiers in …, 2021 - frontiersin.org
Understanding the biological mechanisms of climatic adaptation is of paramount importance
for the optimization of breeding programs and conservation of genetic resources. The aim of …

Characterization of runs of homozygosity, heterozygosity-enriched regions, and population structure in cattle populations selected for different breeding goals

HA Mulim, LF Brito, LFB Pinto, JBS Ferraz, L Grigoletto… - BMC genomics, 2022 - Springer
Background A decline in the level of genetic diversity in livestock can result in reduced
response to selection, greater incidence of genetic defects, and inbreeding depression. In …

Genetic architecture and selection of Chinese cattle revealed by whole genome resequencing

C Mei, H Wang, Q Liao, L Wang… - Molecular biology …, 2018 - academic.oup.com
The bovine genetic resources in China are diverse, but their value and potential are yet to
be discovered. To determine the genetic diversity and population structure of Chinese cattle …

Selection signatures in two oldest Russian native cattle breeds revealed using high-density single nucleotide polymorphism analysis

NA Zinovieva, AV Dotsev, AA Sermyagin… - PLoS …, 2020 - journals.plos.org
Native cattle breeds can carry specific signatures of selection reflecting their adaptation to
the local environmental conditions and response to the breeding strategy used. In this study …

Species composition and environmental adaptation of indigenous Chinese cattle

Y Gao, M Gautier, X Ding, H Zhang, Y Wang, X Wang… - Scientific reports, 2017 - nature.com
Indigenous Chinese cattle combine taurine and indicine origins and occupy a broad range
of different environments. By 50 K SNP genotyping we found a discontinuous distribution of …