Molecular dynamics simulation in drug discovery: opportunities and challenges

R Shukla, T Tripathi - Innovations and implementations of computer aided …, 2021 - Springer
Drug discovery is the process used to discover new candidate medications. In the past, most
drugs were discovered by identification of active-ingredients or by serendipity. Modern drug …

Fasciolosis in India: an overview

H Lalrinkima, C Lalchhandama, SS Jacob… - Experimental …, 2021 - Elsevier
Fasciolosis in ruminants is a relentless constraint in the livestock industry across the world.
Immuno-prophylactic vaccines against fasciolosis may not come up in near future, rendering …

Development of multi-epitope driven subunit vaccine against Fasciola gigantica using immunoinformatics approach

P Kalita, DL Lyngdoh, AK Padhi, H Shukla… - International journal of …, 2019 - Elsevier
Fascioliasis, a serious helminth disease of the livestock population, results from infection
with the parasite Fasciola. Despite the alarming increase in drug resistance, a safe and fully …

Identification of lead molecules against potential drug target protein MAPK4 from L. donovani: An in-silico approach using docking, molecular dynamics and binding …

S Raj, S Sasidharan, VK Dubey, P Saudagar - PloS one, 2019 - journals.plos.org
Leishmaniasis caused by obligate intracellular parasites of genus Leishmania is one of the
most neglected tropical diseases threatening 350 million people worldwide. Protein kinases …

Virtual screening, pharmacokinetics, molecular dynamics and binding free energy analysis for small natural molecules against cyclin-dependent kinase 5 for …

R Shukla, TR Singh - Journal of Biomolecular Structure and …, 2020 - Taylor & Francis
Alzheimer's disease (AD) is a progressive neurodegenerative disorder and characterized by
brain cell death, memory loss and is the most common form of dementia. Although AD has …

Identification of new drug-like compounds from millets as Xanthine oxidoreductase inhibitors for treatment of Hyperuricemia: A molecular docking and simulation study

RK Pathak, A Gupta, R Shukla, M Baunthiyal - Computational Biology and …, 2018 - Elsevier
Xanthine oxidoreductase plays an important role in formation of uric acid and its regulation
during purine catabolism. Uncontrolled expression of this enzyme is responsible for …

Identification of novel small molecules against GSK3β for Alzheimer's disease using chemoinformatics approach

R Shukla, NS Munjal, TR Singh - Journal of Molecular Graphics and …, 2019 - Elsevier
Alzheimer's disease is a rapidly increasing neurodegenerative disease. It is a multifactorial
disease and also a global threat. Several enzymes are implicated in the disease in which …

Structure-based virtual screening, molecular docking, and molecular dynamics simulation of VEGF inhibitors for the clinical treatment of ovarian cancer

S Mukherjee, M Abdalla, M Yadav, M Madhavi… - Journal of Molecular …, 2022 - Springer
Vascular endothelial growth factor (VEGF) and its receptor play an important role both in
physiologic and pathologic angiogenesis, which is identified in ovarian cancer progression …

Anti-icing mechanism of an environmentally sustainable tenebrio molitor antifreeze protein modified asphalt binder via molecular dynamics simulations

S Duan, J Hu, T Ma, X Quan - Construction and Building Materials, 2022 - Elsevier
Environmentally friendly and available tenebrio molitor antifreeze protein (TmAFP) is
capable of retarding ice growth. For optimally automatic anti-icing performance in asphalt …

Structure-based virtual screening, molecular docking, molecular dynamics simulation and pharmacokinetic modelling of cyclooxygenase-2 (COX-2) inhibitor for the …

M Yadav, M Abdalla, M Madhavi, I Chopra… - Molecular …, 2022 - Taylor & Francis
Colorectal cancer is the third most frequent cause of cancer worldwide and is more
prevalent in older individuals of all ages. The recent statistics from World Health …