Epigenetic clock: A promising biomarker and practical tool in aging

R Duan, Q Fu, Y Sun, Q Li - Ageing Research Reviews, 2022 - Elsevier
As a complicated process, aging is characterized by various changes at the cellular,
subcellular and nuclear levels, one of which is epigenetic aging. With increasing awareness …

[HTML][HTML] CD8+ T cells induce interferon-responsive oligodendrocytes and microglia in white matter aging

T Kaya, N Mattugini, L Liu, H Ji… - Nature …, 2022 - nature.com
A hallmark of nervous system aging is a decline of white matter volume and function, but the
underlying mechanisms leading to white matter pathology are unknown. In the present …

Atlas of the aging mouse brain reveals white matter as vulnerable foci

O Hahn, AG Foltz, M Atkins, B Kedir, P Moran-Losada… - Cell, 2023 - cell.com
Aging is the key risk factor for cognitive decline, yet the molecular changes underlying brain
aging remain poorly understood. Here, we conducted spatiotemporal RNA sequencing of …

[HTML][HTML] Understanding the aging hypothalamus, one cell at a time

KH Hajdarovic, D Yu, AE Webb - Trends in neurosciences, 2022 - cell.com
The hypothalamus is a brain region that integrates signals from the periphery and the
environment to maintain organismal homeostasis. To do so, specialized hypothalamic …

[HTML][HTML] A spectral method for assessing and combining multiple data visualizations

R Ma, ED Sun, J Zou - Nature Communications, 2023 - nature.com
Dimension reduction is an indispensable part of modern data science, and many algorithms
have been developed. However, different algorithms have their own strengths and …

[HTML][HTML] Heterochronic parabiosis reprograms the mouse brain transcriptome by shifting aging signatures in multiple cell types

M Ximerakis, KM Holton, RM Giadone, C Ozek… - Nature Aging, 2023 - nature.com
Aging is a complex process involving transcriptomic changes associated with deterioration
across multiple tissues and organs, including the brain. Recent studies using heterochronic …

Dynamic visualization of high-dimensional data

ED Sun, R Ma, J Zou - Nature Computational Science, 2023 - nature.com
Dimensionality reduction (DR) is commonly used to project high-dimensional data into lower
dimensions for visualization, which could then generate new insights and hypotheses …

[HTML][HTML] Cross-species scRNA-seq reveals the cellular landscape of retina and early alterations in type 2 diabetes mice

K Chen, Y Wang, Y Huang, X Liu, X Tian, Y Yang… - Genomics, 2023 - Elsevier
Single-cell RNA sequencing (scRNA-seq) analysis have provided an unprecedented
resolution for the studies on diabetic retinopathy (DR). However, the early changes in the …

A spatiotemporal map of the aging mouse brain reveals white matter tracts as vulnerable foci

O Hahn, AG Foltz, M Atkins, B Kedir, P Moran-Losada… - Biorxiv, 2022 - biorxiv.org
Aging is the key risk factor for cognitive decline, yet the molecular changes underlying brain
aging remain poorly understood. Here, we conducted spatiotemporal RNA-seq of the mouse …

[HTML][HTML] A single-cell transcriptomic analysis of the mouse hippocampus after voluntary exercise

A Methi, MR Islam, L Kaurani, MS Sakib… - Molecular …, 2024 - Springer
Exercise has been recognized as a beneficial factor for cognitive health, particularly in
relation to the hippocampus, a vital brain region responsible for learning and memory …