Computational identification of tissue-specific splicing regulatory elements in human genes from RNA-Seq data
Alternative splicing is a vital process for regulating gene expression and promoting
proteomic diversity. It plays a key role in tissue-specific expressed genes. This specificity is …
proteomic diversity. It plays a key role in tissue-specific expressed genes. This specificity is …
The smallest valid extension-based efficient, rare graph pattern mining, considering length-decreasing support constraints and symmetry characteristics of graphs
U Yun, G Lee, CH Kim - Symmetry, 2016 - mdpi.com
Frequent graph mining has been proposed to find interesting patterns (ie, frequent sub-
graphs) from databases composed of graph transaction data, which can effectively express …
graphs) from databases composed of graph transaction data, which can effectively express …
Combinatorial pattern of histone modifications in exon skipping event
Histone modifications are associated with alternative splicing. It has been suggested that
histone modifications act in combinational patterns in gene expression regulation. However …
histone modifications act in combinational patterns in gene expression regulation. However …
HPC-based parallel algorithms for generating random networks and some other network analysis problems
MM Alam - 2016 - vtechworks.lib.vt.edu
The advancement of modern technologies has resulted in an explosive growth of complex
systems, such as the Internet, biological, social, and various infrastructure networks, which …
systems, such as the Internet, biological, social, and various infrastructure networks, which …
Identifying splicing regulatory elements with de Bruijn graphs
Splicing regulatory elements (SREs) are short, degenerate sequences on pre-mRNA
molecules that enhance or inhibit the splicing process via the binding of splicing factors …
molecules that enhance or inhibit the splicing process via the binding of splicing factors …