Mass spectrometry-based phosphoproteomics in clinical applications

X Wu, YK Liu, AB Iliuk, WA Tao - TrAC Trends in Analytical Chemistry, 2023 - Elsevier
Protein phosphorylation is an essential post-translational modification that regulates many
aspects of cellular physiology, and dysregulation of pivotal phosphorylation events is often …

Structural insights into mis-regulation of protein kinase A in human tumors

J Cheung, C Ginter, M Cassidy… - Proceedings of the …, 2015 - National Acad Sciences
The extensively studied cAMP-dependent protein kinase A (PKA) is involved in the
regulation of critical cell processes, including metabolism, gene expression, and cell …

A ribose-scavenging system confers colonization fitness on the human gut symbiont bacteroides thetaiotaomicron in a diet-specific manner

RWP Glowacki, NA Pudlo, Y Tuncil, AS Luis… - Cell host & …, 2020 - cell.com
Efficient nutrient acquisition in the human gut is essential for microbial persistence. Although
polysaccharides have been well-studied nutrients for the gut microbiome, other resources …

[HTML][HTML] Comparative analysis and validation of the malachite green assay for the high throughput biochemical characterization of terpene synthases

M Vardakou, M Salmon, JA Faraldos, PE O'Maille - MethodsX, 2014 - Elsevier
Terpenes are the largest group of natural products with important and diverse biological
roles, while of tremendous economic value as fragrances, flavours and pharmaceutical …

[HTML][HTML] Characterisation of the selective binding of antibiotics vancomycin and teicoplanin by the VanS receptor regulating type A vancomycin resistance in the …

CS Hughes, E Longo, MK Phillips-Jones… - Biochimica et Biophysica …, 2017 - Elsevier
A-type resistance towards “last-line” glycopeptide antibiotic vancomycin in the leading
hospital acquired infectious agent, the enterococci, is the most common in the UK …

Direct capture of functional proteins from mammalian plasma membranes into nanodiscs

J Roy, H Pondenis, TM Fan, A Das - Biochemistry, 2015 - ACS Publications
Mammalian plasma membrane proteins make up the largest class of drug targets yet are
difficult to study in a cell free system because of their intransigent nature. Herein, we perform …

High level in vivo mucin-type glycosylation in Escherichia coli

P Mueller, R Gauttam, N Raab, R Handrick, C Wahl… - Microbial cell …, 2018 - Springer
Background Increasing efforts have been made to assess the potential of Escherichia coli
strains for the production of complex recombinant proteins. Since a considerable part of …

5-Ethynyl-2′-deoxycytidine and 5-ethynyl-2′-deoxyuridine are differentially incorporated in cells infected with HSV-1, HCMV, and KSHV viruses

S Manska, R Octaviano, CC Rossetto - Journal of Biological Chemistry, 2020 - ASBMB
Nucleoside analogues are a valuable experimental tool. Incorporation of these molecules
into newly synthesized DNA (ie pulse-labeling) is used to monitor cell proliferation or to …

Monitoring ATP hydrolysis and ATPase inhibitor screening using 1H NMR

B Guo, PS Gurel, R Shu, HN Higgs… - Chemical …, 2014 - pubs.rsc.org
We present a versatile method to characterize ATPase and kinase activities and discover
new inhibitors of these proteins. The proton NMR-based assay directly monitors ATP …

Expression of the functional recombinant human glycosyltransferase GalNAcT2 in Escherichia coli

J Lauber, R Handrick, S Leptihn, P Dürre… - Microbial cell …, 2015 - Springer
Background Recombinant protein-based therapeutics have become indispensable for the
treatment of many diseases. They are produced using well-established expression systems …