Mitochondrial pseudogenes: evolution's misplaced witnesses

D Bensasson, DX Zhang, DL Hartl, GM Hewitt - Trends in ecology & …, 2001 - cell.com
Nuclear copies of mitochondrial DNA (mtDNA) have contaminated PCR-based
mitochondrial studies of over 64 different animal species. Since the last review of these …

The current state of insect molecular systematics: a thriving Tower of Babel

MS Caterino, S Cho, FAH Sperling - Annual review of …, 2000 - annualreviews.org
▪ Abstract Insect molecular systematics has undergone remarkable recent growth. Advances
in methods of data generation and analysis have led to the accumulation of large amounts of …

Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy.

H Akashi - Genetics, 1994 - academic.oup.com
I present evidence that natural selection biases synonymous codon usage to enhance the
accuracy of protein synthesis in Drosophila melanogaster. Since the fitness cost of a …

[图书][B] Molecular evolution: a phylogenetic approach

RDM Page, EC Holmes - 2009 - books.google.com
The study of evolution at the molecular level has given the subject of evolutionary biology a
new significance. Phylogenetic'trees' of gene sequences are a powerful tool for recovering …

[PDF][PDF] Analysis of codon usage

JF Peden - 2000 - Citeseer
The genetic code uses 64 codons to represent the 20 standard amino acids and the
translation termination signal. Each codon is recognised by a subset of a cell's transfer …

Genomic Variation in Natural Populations of Drosophila melanogaster

CH Langley, K Stevens, C Cardeno, YCG Lee… - Genetics, 2012 - academic.oup.com
This report of independent genome sequences of two natural populations of Drosophila
melanogaster (37 from North America and 6 from Africa) provides unique insight into forces …

Extent of Gene Duplication in the Genomes of Drosophila, Nematode, and Yeast

Z Gu, A Cavalcanti, FC Chen… - Molecular biology and …, 2002 - academic.oup.com
We conducted a detailed analysis of duplicate genes in three complete genomes: yeast,
Drosophila, and Caenorhabditis elegans. For two proteins belonging to the same family we …

Temporal Patterns of Fruit Fly (Drosophila) Evolution Revealed by Mutation Clocks

K Tamura, S Subramanian… - Molecular biology and …, 2004 - academic.oup.com
Drosophila melanogaster has been a canonical model organism to study genetics,
development, behavior, physiology, evolution, and population genetics for nearly a century …

Inferring weak selection from patterns of polymorphism and divergence at" silent" sites in Drosophila DNA.

H Akashi - Genetics, 1995 - academic.oup.com
Patterns of codon usage and" silent" DNA divergence suggest that natural selection
discriminates among synonymous codons in Drosophila." Preferred" codons are consistently …

Codon Usage Bias and tRNA Abundance in Drosophila

EN Moriyama, JR Powell - Journal of molecular evolution, 1997 - Springer
Codon usage bias of 1,117 Drosophila melanogaster genes, as well as fewer D.
pseudoobscura and D. virilis genes, was examined from the perspective of relative …