An end-to-end workflow for multiplexed image processing and analysis

J Windhager, VRT Zanotelli, D Schulz, L Meyer… - Nature …, 2023 - nature.com
Multiplexed imaging enables the simultaneous spatial profiling of dozens of biological
molecules in tissues at single-cell resolution. Extracting biologically relevant information …

CyTOF® for the Masses

A Iyer, AAJ Hamers, AB Pillai - Frontiers in immunology, 2022 - frontiersin.org
Mass cytometry has revolutionized immunophenotyping, particularly in exploratory settings
where simultaneous breadth and depth of characterization of immune populations is needed …

Flow cytometry: the next revolution

JP Robinson, R Ostafe, SN Iyengar, B Rajwa, R Fischer - Cells, 2023 - mdpi.com
Unmasking the subtleties of the immune system requires both a comprehensive knowledge
base and the ability to interrogate that system with intimate sensitivity. That task, to a …

Spontaneous HIV expression during suppressive ART is associated with the magnitude and function of HIV-specific CD4+ and CD8+ T cells

M Dube, O Tastet, C Dufour, G Sannier, N Brassard… - Cell Host & Microbe, 2023 - cell.com
Spontaneous transcription and translation of HIV can persist during suppressive
antiretroviral therapy (ART). The quantity, phenotype, and biological relevance of this …

A versatile CRISPR-Cas13d platform for multiplexed transcriptomic regulation and metabolic engineering in primary human T cells

V Tieu, E Sotillo, JR Bjelajac, C Chen, M Malipatlolla… - Cell, 2024 - cell.com
CRISPR technologies have begun to revolutionize T cell therapies; however, conventional
CRISPR-Cas9 genome-editing tools are limited in their safety, efficacy, and scope. To …

LAG-3xPD-L1 bispecific antibody potentiates antitumor responses of T cells through dendritic cell activation

E Sung, M Ko, J Won, Y Jo, E Park, H Kim, E Choi… - Molecular Therapy, 2022 - cell.com
Several preclinical studies demonstrate that antitumor efficacy of programmed cell death-1
(PD-1)/programmed death-ligand 1 (PD-L1) blockade can be improved by combination with …

Unsupervised and semi‐supervised learning: The next frontier in machine learning for plant systems biology

J Yan, X Wang - The Plant Journal, 2022 - Wiley Online Library
Advances in high‐throughput omics technologies are leading plant biology research into the
era of big data. Machine learning (ML) performs an important role in plant systems biology …

NET formation is a default epigenetic program controlled by PAD4 in apoptotic neutrophils

YP Zhu, M Speir, ZH Tan, JC Lee, CJ Nowell… - Science …, 2023 - science.org
Neutrophil extracellular traps (NETs) not only counteract bacterial and fungal pathogens but
can also promote thrombosis, autoimmunity, and sterile inflammation. The presence of …

Exploring the role of spatial confinement in immune cell recruitment and regeneration of skin wounds

Y Liu, A Suarez‐Arnedo, ELP Caston… - Advanced …, 2023 - Wiley Online Library
Microporous annealed particle (MAP) scaffolds are injectable granular materials comprised
of micron sized hydrogel particles (microgels). The diameter of these microgels directly …

Single-cell RNA and protein profiling of immune cells from the mouse brain and its border tissues

I Scheyltjens, H Van Hove, K De Vlaminck… - Nature …, 2022 - nature.com
Brain–immune cross-talk and neuroinflammation critically shape brain physiology in health
and disease. A detailed understanding of the brain immune landscape is essential for …