Tackling undruggable targets with designer peptidomimetics and synthetic biologics

CS Swenson, G Mandava, DM Thomas… - Chemical …, 2024 - ACS Publications
The development of potent, specific, and pharmacologically viable chemical probes and
therapeutics is a central focus of chemical biology and therapeutic development. However, a …

The interplay between the RNA decay and translation machinery in eukaryotes

AM Heck, J Wilusz - Cold Spring Harbor Perspectives in …, 2018 - cshperspectives.cshlp.org
RNA decay plays a major role in regulating gene expression and is tightly networked with
other aspects of gene expression to effectively coordinate post-transcriptional regulation …

Cap analogs modified with 1, 2-dithiodiphosphate moiety protect mRNA from decapping and enhance its translational potential

M Strenkowska, R Grzela, M Majewski… - Nucleic acids …, 2016 - academic.oup.com
Along with a growing interest in mRNA-based gene therapies, efforts are increasingly
focused on reaching the full translational potential of mRNA, as a major obstacle for in vivo …

Structural basis of mRNA-cap recognition by Dcp1–Dcp2

JS Mugridge, M Ziemniak, J Jemielity… - Nature structural & …, 2016 - nature.com
Removal of the 5′ cap on mRNA by the decapping enzyme Dcp2 is a critical step in 5′-to-
3′ mRNA decay. Understanding the structural basis of Dcp2 activity has been a challenge …

Applications of phosphate modification and labeling to study (m) RNA caps

M Warminski, PJ Sikorski, J Kowalska… - Phosphate Labeling and …, 2017 - Springer
The cap is a natural modification present at the 5'ends of eukaryotic messenger RNA
(mRNA), which because of its unique structural features, mediates essential biological …

Structure of the activated Edc1-Dcp1-Dcp2-Edc3 mRNA decapping complex with substrate analog poised for catalysis

JS Mugridge, RW Tibble, M Ziemniak… - Nature …, 2018 - nature.com
The conserved decapping enzyme Dcp2 recognizes and removes the 5′ eukaryotic cap
from mRNA transcripts in a critical step of many cellular RNA decay pathways. Dcp2 is a …

mRNA decapping: finding the right structures

C Charenton, M Graille - Philosophical Transactions of …, 2018 - royalsocietypublishing.org
In eukaryotes, the elimination of the m7GpppN mRNA cap, a process known as decapping,
is a critical, largely irreversible and highly regulated step of mRNA decay that withdraws the …

Discovery of cellular substrates of human RNA-decapping enzyme DCP2 using a stapled bicyclic peptide inhibitor

Y Luo, JA Schofield, Z Na, T Hann, MD Simon… - Cell chemical …, 2021 - cell.com
DCP2 is an RNA-decapping enzyme that controls the stability of human RNAs that encode
factors functioning in transcription and the immune response. While> 1,800 human DCP2 …

RNA stability and metabolism in regulated cell death, aging and diseases

C Falcone, C Mazzoni - FEMS yeast research, 2018 - academic.oup.com
The stability of RNAs represents a crucial point for cell life in that these molecules code for
proteins and also play structural and regulatory functions. In this review, we will mainly focus …

Fluorescence-based activity screening assay reveals small molecule inhibitors of vaccinia virus mRNA decapping enzyme D9

M Bednarczyk, JK Peters, R Kasprzyk… - ACS Chemical …, 2022 - ACS Publications
Vaccinia virus (VACV) represents a family of poxviruses, which possess their own
decapping machinery as a part of their strategy to eliminate host mRNAs and evade the …