Ecology and evolution of metabolic cross-feeding interactions in bacteria

G D'Souza, S Shitut, D Preussger, G Yousif… - Natural product …, 2018 - pubs.rsc.org
Literature covered: early 2000s to late 2017 Bacteria frequently exchange metabolites with
other micro-and macro-organisms. In these often obligate cross-feeding interactions, primary …

Mathematical modelling of bacterial quorum sensing: a review

J Pérez-Velázquez, M Gölgeli… - Bulletin of mathematical …, 2016 - Springer
Bacterial quorum sensing (QS) refers to the process of cell-to-cell bacterial communication
enabled through the production and sensing of the local concentration of small molecules …

From single-particle stochastic kinetics to macroscopic reaction rates: fastest first-passage time of N random walkers

DS Grebenkov, R Metzler, G Oshanin - New Journal of Physics, 2020 - iopscience.iop.org
We consider the first-passage problem for N identical independent particles that are initially
released uniformly in a finite domain Ω and then diffuse toward a reactive area Γ, which can …

Dynamic regulation of N-acyl-homoserine lactone production and degradation in Pseudomonas putida IsoF

A Fekete, C Kuttler, M Rothballer… - FEMS Microbiology …, 2010 - academic.oup.com
The biocontrol strain Pseudomonas putida IsoF, which was isolated from a tomato
rhizosphere, is a known N-acyl-homoserine lactone (AHL) producer with only one LuxI/LuxR …

Design and analysis of wireless communication systems using diffusion-based molecular communication among bacteria

A Einolghozati, M Sardari, F Fekri - IEEE transactions on …, 2013 - ieeexplore.ieee.org
The design of biologically-inspired wireless communication systems using bacteria as the
basic element of the system is initially motivated by a phenomenon called Quorum Sensing …

Emergent robustness of bacterial quorum sensing in fluid flow

MP Dalwadi, P Pearce - Proceedings of the National …, 2021 - National Acad Sciences
Bacteria use intercellular signaling, or quorum sensing (QS), to share information and
respond collectively to aspects of their surroundings. The autoinducers that carry this …

An information theoretic framework to analyze molecular communication systems based on statistical mechanics

IF Akyildiz, M Pierobon… - Proceedings of the …, 2019 - ieeexplore.ieee.org
Over the past 10 years, molecular communication (MC) has established itself as a key
transformative paradigm in communication theory. Inspired by chemical communications in …

Relaying in diffusion-based molecular communication

A Einolghozati, M Sardari, F Fekri - 2013 IEEE International …, 2013 - ieeexplore.ieee.org
This paper is eligible for the student paper award. Molecular communication between
biological entities is a new paradigm in communications. Recently, we studied molecular …

Temporal Convolutional Network-Based Signal Detection for Magnetotactic Bacteria Communication System

C Bai, A Zhu, X Lu, Y Zhu… - IEEE Transactions on …, 2023 - ieeexplore.ieee.org
Molecular communication (MC) aims to use signaling molecules as information carriers to
achieve communication between biological entities. However, MC systems severely suffer …

Burst statistics in an early biofilm quorum sensing model: the role of spatial colony-growth heterogeneity

O Kindler, O Pulkkinen, AG Cherstvy, R Metzler - Scientific Reports, 2019 - nature.com
Quorum-sensing bacteria in a growing colony of cells send out signalling molecules (so-
called “autoinducers”) and themselves sense the autoinducer concentration in their vicinity …