A Survey of Archaeal Restriction–Modification Systems

BP Anton, RJ Roberts - Microorganisms, 2023 - mdpi.com
When compared with bacteria, relatively little is known about the restriction–modification
(RM) systems of archaea, particularly those in taxa outside of the haloarchaea. To improve …

Randomized Algorithm-Based Novel Approach to Detect Motif in the Genome of Zika Virus

PS Mahapatro, JR Saini, S Vaidya - Doctoral Symposium on …, 2024 - Springer
Motif finding in deoxyribonucleic acid (DNA) has gained a lot of importance in bioinformatics.
Motifs have complicated patterns. The motifs are used to identify the transcription factors and …

Caractérisation des erreurs de séquençage non aléatoires: application aux mosaïques et tumeurs hétérogènes

C Saad - 2018 - theses.hal.science
L'arrivée des technologies de séquençage d'ADN à haut-débit a représenté une révolution
dans le domaine de la génomique personnalisée, en raison de leur résolution et leur faible …

qsmf: An approximate algorithm for quotum planted motif search on chip-seq data

H Al-Shaikhli, E de Doncker - 2019 IEEE International …, 2019 - ieeexplore.ieee.org
Motif discovery is the problem of finding common substrings in a set of biological strings.
Therefore, it can be applied to find Transcription Factors Binding Sites (TFBS) that have …

Genome-wide identification of preferentially located motifs in gene-proximal regions provides new insights into cis-regulatory sequences in plants

J Rozière, C Guichard, V Brunaud, ML Martin… - bioRxiv, 2022 - biorxiv.org
The identification of cis-regulatory elements controlling gene expression is an arduous
challenge that is being actively explored to discover the key genetic factors responsible for …

[PDF][PDF] Statistical methods for analysing high throughput sequencing data

H Richard - 2022 - hal.science
The discovery of the structure of the DNA molecule (Franklin & Gosling, 1953; Watson &
Crick, 1953; Wilkins, Stokes, & Wilson, 1953) and the formulation of the central dogma of …

An Inter-Institutional and Inter-Disciplinary Collaborative Learning to in-silico Motif Discovery in Molecular Sequences

SFA Mohsin, SSK Nair, SSN Al Maskari… - 2019 IEEE Global …, 2019 - ieeexplore.ieee.org
Collaborative learning boosts student involvement and engagement to be responsible and
accountable for the success of their own learning. However, developing critical collaborative …

Approximate Algorithms for Regulatory Motif Discovery in DNA

HI Al-Shaikhli - 2019 - scholarworks.wmich.edu
Motif discovery is the problem of finding common substrings within a set of biological strings.
Therefore it can be applied to finding Transcription Factor Binding Sites (TFBS) that have …

Study on the diagnostic value of high-throughput sequencing technology in reproductive genetic testing

J Lei, WJ Wang, P Qu, JL Zhang, K Han… - Archives of Clinical …, 2022 - archivespsy.com
Objective: Before embryo transfer, reproductive genetic testing is of great significance in
elderly women and people with repeated implantation failures. This study mainly explores …

AN EXPANDED MOTIF ASSESSMENT AND RANKING SUITE FOR HUMAN AND INSECT RESEARCH

NF MOKAYA - 2020 - elibrary.pu.ac.ke
Motif Assessment and Ranking Suite (MARS-http://bioinf. ict. ru. ac. za/) is a benchmark web
server for MARSTools developed to evaluate, assess, rank and elucidate transcription factor …